Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch6g1208 | CGCCATGCAGCTCTCCCGCCTGGCCCGACACCGTGGCCCTTCGTCGGCTGCCTCCCGGAAATGTGGACGAATAACACACTGCCACACCAATGGATTCATGCAATAATGAAGCAGTACGACACTGAAATAGCATGCATTCGTCTCGGGAATACCTACGTCATTCCAGTGACTTCTCCACAACTTGCTCTCGAATTTCTAAAGACCCATGATTCTGTCTTTGCATCACGACCAATGCTCGACACTACCAAAATCATAACCCGTGGATTCCTTACCACTGCTCTTTCGCCATTGGGAGAGCAATGGAAGAAGATGCGCAAAATACTTACTTCACAAATACTTAATCCCTCCACCCTCCACCAAATGCTGGCTCATAGAACACACGAAGCCGACACTCTTTTACGCTACATTTTCAGTCTCACCAAGTCGAAAGGTGCGGCGGTCGTCAACTTGAGAAGCGTAACTCTACATTATTGTGGCAACGTTATTAGAAGAGTGCTATTCAACAGAAGATACTACGGCGCTGGCCAAGAGGATGGAGGGCCAACTTTTGAAGAAGAAGAGCACATTCAAGCACTGCTAGCATTGCTCAAGTATATCAATGCCTTTTCTGTATCGGATTTCATACCTTGTTTGAGGCCGTTTGATGTGGACAAACATCAAAAGATTGTAAAAGAAGGTTTGAAAGTGGTGAGAAAGCATGACGAACCGATTGTGGATGAGAGAGTGCAACAATGGAAATATGGAAAGAGGAAAGAGATCGAAGATTTTCTTGATATCTTTATCGCGCTTAAATATGAAAATGGAAAATCGTTGCTATCGATCGAAGAGATTAAAGCTGAAATCACGGAGCTACAAATGGCAACGATTGATAATCCTTCAAATGCAGTAGAATGGGCAATGGCAGAATTACTCAATCAACCAAAAATTCTCCAGAAAGCAATTGAAGAACTAGATAGGATTGTTGAAAGGGATAGACTTGTTCAAGAATATGATATCCCACAACTTAAATTTATTGCTTGTGTTAGAGAATCTTTCCGACTCCATCCATTTACACCATTCAATGTTCCTCATGTCTCAAATTCCAATGTCATTGTAGCTGGATACTTTATCCCAAAAGGCAGCCAAGTCCTACTTAGTCGAATCGGTCTCGGTCGAAACCTGAAGATTTGGAAGGATCCAATACGATTCGATCCAGAACGCCATCTCAAGGATAAGACGATGGGTGACATGGGATTATCATAACCAAATCTACGATTCATTAGCTTCACTAAAGGGAGGAGAGGCTGCATGGGTAGCACACTAGGCACAAACATCACCATGATGCTATTTGCTAGGTTGCTTCAAGGGTTTTCGTGGAACTTAATGCCAGGAATGAGCAAGGTCGAGTTCTCTCAATGTGATGATTTCTCCCTCCCTAAACCATTGCATTTGTATGCAGAGCCACGTCTATCTCATAATATGTATCCA | 1467 | 43.22 | RHAALPPGPTPWPFVGCLPEMWTNNTLPHQWIHAIMKQYDTEIACIRLGNTYVIPVTSPQLALEFLKTHDSVFASRPMLDTTKIITRGFLTTALSPLGEQWKKMRKILTSQILNPSTLHQMLAHRTHEADTLLRYIFSLTKSKGAAVVNLRSVTLHYCGNVIRRVLFNRRYYGAGQEDGGPTFEEEEHIQALLALLKYINAFSVSDFIPCLRPFDVDKHQKIVKEGLKVVRKHDEPIVDERVQQWKYGKRKEIEDFLDIFIALKYENGKSLLSIEEIKAEITELQMATIDNPSNAVEWAMAELLNQPKILQKAIEELDRIVERDRLVQEYDIPQLKFIACVRESFRLHPFTPFNVPHVSNSNVIVAGYFIPKGSQVLLSRIGLGRNLKIWKDPIRFDPERHLKDKTMGDMGLSPNLRFISFTKGRRGCMGSTLGTNITMMLFARLLQGFSWNLMPGMSKVEFSQCDDFSLPKPLHLYAEPRLSHNMYP | 488 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 9284297 | 9286310 | + | MC06g1014 | Mch6g1208 | 690655 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch6g1208 | 488 | PRINTS | E-class P450 group I signature | 338 | 356 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g1208 | 488 | PRINTS | E-class P450 group I signature | 428 | 451 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g1208 | 488 | PRINTS | E-class P450 group I signature | 61 | 82 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g1208 | 488 | PRINTS | E-class P450 group I signature | 418 | 428 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g1208 | 488 | PRINTS | E-class P450 group I signature | 379 | 403 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g1208 | 488 | PRINTS | E-class P450 group I signature | 296 | 322 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g1208 | 488 | PRINTS | E-class P450 group I signature | 157 | 175 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g1208 | 488 | Pfam | Cytochrome P450 | 6 | 473 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g1208 | 488 | PANTHER | CYTOCHROME P450 703A2-RELATED-RELATED | 2 | 487 | IPR051382 | - | |
| Mch6g1208 | 488 | SUPERFAMILY | Cytochrome P450 | 6 | 481 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g1208 | 488 | Gene3D | Cytochrome P450 | 1 | 486 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch6g1208 | Mch-Chr6:9284297 | Mch6g1218 | Mch-Chr6:9444223 | 1.22E-266 | dispersed | |
| Mch6g1205 | Mch-Chr6:9265732 | Mch6g1208 | Mch-Chr6:9284297 | 8.96E-223 | proximal | |
| Mch6g1208 | Mch-Chr6:9284297 | Mch6g1209 | Mch-Chr6:9307454 | 6.64E-248 | tandem |
Pathway information