Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g1218 ATGGAAGCTTTATTATTCATCAGTCAATTAACTTATCAAAACTCCCCAACAGCCATTACCAAAACCTTCACTCTCTTCGTTTTCATGGCTTTCATTTCTGCCATTTTTTCTCAATGTTACCGTAAGAGGAAACACTCAGTTCTCCAACTCCCACCAGGCCCAAATCCATGGCCTCTCGTGGGCTGCCTCCCAGCAATGTTGGCCACAAAATCACCAAAATACAAATGGATTCATGCAGTGATGAAGCAATTCGACACTGAAATCGCATGCATTCGTCTCGGAAATACCTACGTAATGCCAGTGACTTCTCCAGAACTGGCTGTTGAATTTCTCAAGAGACATGACTCTGTCTTTGCATCACGTTCCACCATCTCCAACACTGTCAATGTCTTGTCTCGTGGACTTCTTACCACAGCTTTTTCACCATTGGGACACCAATGGAAGAAGATGAGAAGAATACTTGCATCGGAAATATTCTGTCCATCGACTCTTCATCAGATGCTTGGCCACAGAACTAACGAGGCCGATACTCTTCTTCGTTATATTTTCAGCCTTACCACTACTAACACTGTCAATAAAGACGGTGCAGTTGTTAATGTGAGAAGCGTAACACAACATTACTGTGGTAACATTATCAGAAGAATGCTATTCAACAAAAGGTACTATGGCAAAGGGAGGGAAGATGGAGGGCCAAGTTTTGAAGAAGAAGAGCATAATCAAGCGTTGCTAACAATTCTAAGGCATGTTAATGCATTTTCTATATCAGATTTCATGCCTTGTTTGAAGCCATTTGATTTGGATGGACATGAGAAGATCATGAAAAGAGCTTTGAAAGCCCTTTGGAAGTATGATGAACCAATTATAAATGAGAGGGTGCAACAATGGAAAGATGGGAAAAGGGAAGGCGCAGAGGACATTCTTGATATCCTCATTTCAACTAAAGATGGGAATGGAAAATCGTTGCTGACAATTGACGAGATCAAGGCTCAAATCACAGAACTACAAATTGCAACGATCGATAATCCTTCGAATGCAGTGGAGTGGACAATGGCAGAATTACTCAATCAACCAAAGATTCTCCAAAAAGCAATTGAAGAATTGGACAGAGTAGTCGGAAGAGAAAGACTTGTTCAAGAGTCTGACATCCCAAAACTCAAGTATCTCACGGCTTGTGCCAGAGAATCCTTTCGACTTCATCCATTTTCACCTTTCAATATTCCTCATGTCTCAAACGCTGACATCGTTGTGGCCGGTTACTTTATCCCGAAAGGTAGTGAAGTCATTCTGAGTCGGTCAGGACTCGGTCGAAACCCAAGGATTTGGGAGGATCCGATGCGTTTCGATCCAGAACGTCATCTCAAGGATGAGACAGTTGAACTGGGATTATCAGAACCAAATCTAAGATTCATTAGCTTCACCCGAGGAAGAAGAGGCTGTGTGGGTAGCTCATTGGGCACAAACATAACCATGATGCTACTTGGTAGGTTGCTGCAAGGGTTTTCATGGAGCTTACCATTTGGAACAACAAAGATAGAATTCTCTGAGGCCGATGAACTCTCCCTCCCGAAGCCATTACACTTGCATGCAAAGCCACGCCTGCCTCATATTATGTACCCAACTTCTTGA 1626 42.74 MEALLFISQLTYQNSPTAITKTFTLFVFMAFISAIFSQCYRKRKHSVLQLPPGPNPWPLVGCLPAMLATKSPKYKWIHAVMKQFDTEIACIRLGNTYVMPVTSPELAVEFLKRHDSVFASRSTISNTVNVLSRGLLTTAFSPLGHQWKKMRRILASEIFCPSTLHQMLGHRTNEADTLLRYIFSLTTTNTVNKDGAVVNVRSVTQHYCGNIIRRMLFNKRYYGKGREDGGPSFEEEEHNQALLTILRHVNAFSISDFMPCLKPFDLDGHEKIMKRALKALWKYDEPIINERVQQWKDGKREGAEDILDILISTKDGNGKSLLTIDEIKAQITELQIATIDNPSNAVEWTMAELLNQPKILQKAIEELDRVVGRERLVQESDIPKLKYLTACARESFRLHPFSPFNIPHVSNADIVVAGYFIPKGSEVILSRSGLGRNPRIWEDPMRFDPERHLKDETVELGLSEPNLRFISFTRGRRGCVGSSLGTNITMMLLGRLLQGFSWSLPFGTTKIEFSEADELSLPKPLHLHAKPRLPHIMYPTS 541
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 9444223 9447170 + MC06g1016 Mch6g1218 690665
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch6g1218 541 SUPERFAMILY Cytochrome P450 51 532 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g1218 541 Gene3D Cytochrome P450 43 535 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g1218 541 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 22 536 IPR051382 -
Mch6g1218 541 Pfam Cytochrome P450 51 524 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g1218 541 PRINTS E-class P450 group I signature 346 372 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g1218 541 PRINTS E-class P450 group I signature 469 479 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g1218 541 PRINTS E-class P450 group I signature 106 127 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g1218 541 PRINTS E-class P450 group I signature 430 454 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g1218 541 PRINTS E-class P450 group I signature 389 407 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g1218 541 PRINTS E-class P450 group I signature 479 502 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch6g1218 541 PRINTS E-class P450 group I signature 207 225 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g1205 Mch-Chr6:9265732 Mch6g1218 Mch-Chr6:9444223 4.22E-234 dispersed
Mch6g1208 Mch-Chr6:9284297 Mch6g1218 Mch-Chr6:9444223 1.22E-266 dispersed
Mch6g1216 Mch-Chr6:9402222 Mch6g1218 Mch-Chr6:9444223 0 dispersed
Mch6g1218 Mch-Chr6:9444223 Mch8g1964 Mch-Chr8:21600893 2.25E-291 dispersed
Mch6g1217 Mch-Chr6:9420979 Mch6g1218 Mch-Chr6:9444223 2.93E-256 tandem
Mch6g1218 Mch-Chr6:9444223 Mch6g1219 Mch-Chr6:9461284 8.90E-123 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g1218 - - - 0.0