Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g1311 ATGACCATGGGTGTTTCAGGAAAATGGTTCAAAGCTTTAGTTGGTTCAAAGAAATCTGAAAAATCTCAGTCTTCAGAAAATGATGAAAATGCGAGGACAGTCAATAACAAGTTTTGGCATCGGAGAAAGCATTCTGTCGATATAGATGCTGAAAAACTTCAGCATGATTTTCATTCTAATTTTACCCCATTTGTTGGAGAGTCCTGCACTCTTTCGGATCCTGAAGTTGCTACTATTCTTTCTGATTCGCTTCAAACATGTGATGCATTGCAAAGTCGTCAGAACAATATAGAAGAACAGGCTGCCATACGCATCCAAACAATGTTTAGAGGATTTCTGGCCAGAAGAGCTCTCCGAGCTCTCAAGGGATTGGTTAGACTTCAAGCTCTTGTCAGGGGTCATGCTGTCAGAAAACAAGCTGCAATAACTCTTCGCTGTATGCAAGCTTTAGTGAGAGTACAGGCTCGTGTTCGAGCAAGGCGTGTACGTATTGCATTGGAGAGTGAAACCGCACAACAAAAACTGCAACAACATCTTGAAAATCAGGCTCGAGTTCGAGAAATTGAAGAAGGTTGGTGCGACAGTGTTGGATCTGTTGAAGAAATTCAAACAAAATTATTGAAAAGGCAGGAGGCTGCAGCTAAACGTGAGAGAGCCATGGCATATGCTCTGGCTCATCAGTGGCAAGCAGGATCAAGACAGCAGGCTGCCCTCTCTCAGTTTGAACCAGATAAAAGCAGCTGGGGTTGGAACTGGTTGGAAAGATGGATGGCTGTTCGTCCATGGGAAAACCGCTTTCTCGATATTAATCTCAGAGATGGAGTGATGATTCGTGAAGACGGATCAGCTGAGGCCAAAAGTAACACTAAATCTCATCAAAGAACTACTGGCAAGAAAACAAACTTAGTGACTGATCAATCAAACCTCTCAAGCCAAAAAACTGCTGCCTCACATTCTGATGGATGTGGTTCATCATCACCCTCTAAGTCAGCTGGCACTATAGAGGTATCTAGTGCACAGATTCAAAAGCCCAAGAATAAACTTGCCCCTGAGAGGCCATTTGAAGAAGTCAAATCTAGAGTTGATACTGGTTTAAGATCCCATAGCAATCCGAAAGAGAGATCCACACCATTGGTCAAAAATGCAAAGAAGCGATTATCCATGCCTAACAATGATCCTGGGAGTCAAAATCAAACCGTCAGGAATTCGAACAGAACTGCAGGCAAAGTGACCGCTACCAAGTCCATCAACGACAGACCCAAGTCGATTTCAAAGAAATCTGCTAAGCCC 1290 43.33 MTMGVSGKWFKALVGSKKSEKSQSSENDENARTVNNKFWHRRKHSVDIDAEKLQHDFHSNFTPFVGESCTLSDPEVATILSDSLQTCDALQSRQNNIEEQAAIRIQTMFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRIALESETAQQKLQQHLENQARVREIEEGWCDSVGSVEEIQTKLLKRQEAAAKRERAMAYALAHQWQAGSRQQAALSQFEPDKSSWGWNWLERWMAVRPWENRFLDINLRDGVMIREDGSAEAKSNTKSHQRTTGKKTNLVTDQSNLSSQKTAASHSDGCGSSSPSKSAGTIEVSSAQIQKPKNKLAPERPFEEVKSRVDTGLRSHSNPKERSTPLVKNAKKRLSMPNNDPGSQNQTVRNSNRTAGKVTATKSINDRPKSISKKSAKP 430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 10866131 10873814 - MC06g1077 Mch6g1311 690758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g1311 430 MobiDBLite consensus disorder prediction 288 344 - -
Mch6g1311 430 Gene3D - 98 140 - -
Mch6g1311 430 ProSiteProfiles IQ motif profile. 98 126 - -
Mch6g1311 430 SMART iq_5 97 119 IPR000048 GO:0005515(InterPro)
Mch6g1311 430 SMART iq_5 120 141 IPR000048 GO:0005515(InterPro)
Mch6g1311 430 MobiDBLite consensus disorder prediction 281 430 - -
Mch6g1311 430 PANTHER IQ-DOMAIN 5-RELATED 7 387 - -
Mch6g1311 430 ProSiteProfiles IQ motif profile. 122 149 - -
Mch6g1311 430 MobiDBLite consensus disorder prediction 348 369 - -
Mch6g1311 430 MobiDBLite consensus disorder prediction 388 418 - -
Mch6g1311 430 Pfam IQ calmodulin-binding motif 100 119 IPR000048 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g1067 Mch-Chr10:7794760 Mch6g1311 Mch-Chr6:10866131 7.33E-33 dispersed
Mch1g0786 Mch-Chr1:11528501 Mch6g1311 Mch-Chr6:10866131 1.05E-28 dispersed
Mch4g2077 Mch-Chr4:22941834 Mch6g1311 Mch-Chr6:10866131 6.13E-34 dispersed
Mch5g1773 Mch-Chr5:18235496 Mch6g1311 Mch-Chr6:10866131 2.81E-26 dispersed
Mch6g1311 Mch-Chr6:10866131 Mch9g0244 Mch-Chr9:1837269 4.20E-29 dispersed
Mch6g1311 Mch-Chr6:10866131 Mch11g0421 Mch-Chr11:2644375 3.00E-46 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g1311 - - - 0.0