Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch6g1342 | ATGGAGCATTTTCTGGTCTCTCTGTTGATATTTTTCGTGTCCGTTGTCTGCGTGGGCCTCTTCATCCTGTTCTACAAGCACAAATCCCCGTTCTCGTATCCAAACATTCCTCCCGGCGGCATCGGATTTCCGATCATCGGCGAGAGCCTGGAGTTCTTCTCCACCGGATGGAAAGGCGAGCCGGAGAAGTTCATCTTCGACCGCATCAACAAGTACAAGTCCCACATCTTCAAGACCTCCATCGTCGGCGCTCCGGCCGCCGTCTTCTGCGGCCCCACCTGCAACAAGTTCCTCTTCTCCAACGAGAACAAGCTCGTCACCGCCTGGTGGCCCGACTCCGTCAACAAAATCTTCCCCTCTTCCACCCAGACCAGCTCCATGGAGGAGGCCAAGAAACTCAAGAAGCTCCTCCCCCAGTTCCTTAAGCCCGAGGCTCTCCACCGTTACATCGGAATCATGGATGCCCTCGCCCACCGCCACTTCGCTTCCTCCTGGGAGAACAAGGACCAAGTCCTCGTCTTCCCCCTCGCCAAGAGCTTCACCTTCTCGTTGGCGTGCCGGCTGTTCGTGAGCGTGGAGGACGAAGCGCACGTGGAGAGGCTATCGGGGCCGTTTCAGCACATTGCGGCGGGGATCATATCGATGCCGATAGATTTTCCAGGAACGCCGTTCAATCGAGGAATCAAGGCGTCGAACTTCATCCGGAAGGAACTCCTGTCGATCGTGAAGCAGAGGAAAGTGGATCTGGCGGAAGGGAAGGCGTCGCCCACGCAGGACATTCTGTCTCACATGCTTCTCACGTGCGATGAGAACGGAGCGTACATGAACGAATTGGACATCGCCGATAAGATTCTCGGCCTCTTGATCGGCGGCCACGACACCGCCAGCGCCGCCTGCACCTTCATCGTCAAGTTCCTCGCTGAGCTTCCCCACATCTACGACGGCGTTTACAAAGAGCAAATGGCAATAGCAAAGGCGAAAGCCCCAGGGGAGCTATTGAACTGGGAAGACATACAGAAAATGAAGTATTCATGGAACGTGGCTTGTGAAGTGCTGAGACTTGCTTCCCCACTCCAAGGGGCCTTTAGAGAAGCCATAAACGACTTCGTTTTCAATGGCTTCTATATTCCCAAGGGTTGGAAGTTATATTGGAGTTCAAACTCTACACACAAAAACGCAGATTACTTCCCCGACCCTTATACATTCGATCCATCAAGATTTGAGGGCAACGGTCCAGCGCCCTACACTTTCGTGCCCTTCGGCGGAGGCCCGAGAATGTGCCCTGGAAAAGAGTATGCCAGGCTCGAGATCCTCGTGTTCATGCACAACTTGGTCAAGAGATTCAAATGGGCGAAGATACTCGAGAAAGAGAAGATCGTCGTCGACCCGATGCCAATTCCTCAGAAAGGCCTCCCCGTTCGCCTTTTTCCTCATAAAACTGTCTCTGCTTAG | 1452 | 53.99 | MEHFLVSLLIFFVSVVCVGLFILFYKHKSPFSYPNIPPGGIGFPIIGESLEFFSTGWKGEPEKFIFDRINKYKSHIFKTSIVGAPAAVFCGPTCNKFLFSNENKLVTAWWPDSVNKIFPSSTQTSSMEEAKKLKKLLPQFLKPEALHRYIGIMDALAHRHFASSWENKDQVLVFPLAKSFTFSLACRLFVSVEDEAHVERLSGPFQHIAAGIISMPIDFPGTPFNRGIKASNFIRKELLSIVKQRKVDLAEGKASPTQDILSHMLLTCDENGAYMNELDIADKILGLLIGGHDTASAACTFIVKFLAELPHIYDGVYKEQMAIAKAKAPGELLNWEDIQKMKYSWNVACEVLRLASPLQGAFREAINDFVFNGFYIPKGWKLYWSSNSTHKNADYFPDPYTFDPSRFEGNGPAPYTFVPFGGGPRMCPGKEYARLEILVFMHNLVKRFKWAKILEKEKIVVDPMPIPQKGLPVRLFPHKTVSA | 483 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 11138427 | 11142350 | + | MC06g1090 | Mch6g1342 | 690789 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch6g1342 | 483 | PRINTS | P450 superfamily signature | 290 | 307 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g1342 | 483 | PRINTS | P450 superfamily signature | 418 | 427 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g1342 | 483 | PRINTS | P450 superfamily signature | 427 | 438 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g1342 | 483 | PANTHER | CYTOCHROME P450 26 | 35 | 456 | - | GO:0004497(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
| Mch6g1342 | 483 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 420 | 429 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch6g1342 | 483 | SUPERFAMILY | Cytochrome P450 | 31 | 477 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g1342 | 483 | Pfam | Cytochrome P450 | 37 | 455 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g1342 | 483 | PRINTS | E-class P450 group I signature | 417 | 427 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g1342 | 483 | PRINTS | E-class P450 group I signature | 427 | 450 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g1342 | 483 | PRINTS | E-class P450 group I signature | 279 | 296 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g1342 | 483 | PRINTS | E-class P450 group I signature | 385 | 409 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g1342 | 483 | CDD | CYP90-like | 68 | 477 | - | - | |
| Mch6g1342 | 483 | Gene3D | Cytochrome P450 | 27 | 477 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g1342 | 483 | FunFam | Taxadiene 5-alpha hydroxylase | 27 | 478 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch11g1181 | Mch-Chr11:8304591 | Mch6g1342 | Mch-Chr6:11138427 | 1.04E-63 | dispersed | |
| Mch4g0066 | Mch-Chr4:460172 | Mch6g1342 | Mch-Chr6:11138427 | 2.35E-85 | dispersed | |
| Mch6g0446 | Mch-Chr6:2977366 | Mch6g1342 | Mch-Chr6:11138427 | 8.57E-216 | dispersed | |
| Mch6g0447 | Mch-Chr6:2989965 | Mch6g1342 | Mch-Chr6:11138427 | 1.28E-249 | dispersed | |
| Mch6g1342 | Mch-Chr6:11138427 | Mch8g0687 | Mch-Chr8:4931201 | 4.83E-74 | dispersed | |
| Mch6g1342 | Mch-Chr6:11138427 | Mch4g0691 | Mch-Chr4:4614509 | 4.06E-77 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch6g1342 | K20667 | - | csv:101206033 | 811.601 |