Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g1401 ATGGGGTCCTGCTTGTCTACAGGAGGTATGAGGGCCATTCCTGGTGCTCCTGTATCTCCTGTGTTGGTAGCAAGGAAAGAGAAACACTCAGAAATTGAGCTGAAGTCTGAGAATTCTGTGCTCGAGCCGCAGAGTGAAGCAACAGTGCATAGAATTCCTGGTAGGATGTTCTTGAATGGATCGACTGAAGTCGCCTCTCTTCATACTCAACAGGGCAAGAAAGGGATGAACCAAGATGCCATGATTGTATGGGAGAATTTTGGCTCCAGAACCGATACTTTCTTCTGTGGAGTTTTCGATGGTCATGGTCCTAATGGTCATCTGGTTGCAAAAAGAGTGAGGGATTCTCTTCCTCTGAAGCTGACTGCACATTGGGAAGCTAATTCAAGCAATGATGGTATTTCAAAAGAGCTCAGTTGCAAAACAGAACGTGTAAACTATGAAGATTCTGCCTTAGGAACTGTTTTGGAGGAATCTAGTTCCCCTATCGATCGCAAGGGAACTGGCAATCACCCTGAAATCTCTCAAAAACTGAAGGAATCGTTTCTGAAGGCTTTTAAGATAATGGATGGAGAACTCAGAATGCAACCAAGTATTGATTGCTTCTGTAGTGGGACAACAGCAGTAGCTCTTGTTAAGCAGGGTCGAGATCTTGTTATTGGAAATGTTGGGGACTCCAGAGCTGTGCTGGGTACCAGAGATAAGGATAATTCTCTCCTTGCAGTTCAGTTGACCATAGATCTCAAGCCAGACGTTCCAGCGGAAGCTGAGAGAATTCTCAAATGCAAAGGTCGGGTATTTGCTCATCGAGATGAACCAGAAGTTGCTAGAGTATGGCTTCCGAACAACGATTCCCCCGGGCTGGCCATGGCTCGATCATTTGGGGACTTCTGCCTCAAGGATTTCGGTTTAATTTCTGTTCCTGAACTATCATATCGATTTCTTACAGAGAAGGATGAGTTCATAGTTTTAGCCACAGACGGAATTTGGGATGTTCTCTCAAACAAAGAGGTGGTGGACATTGTAGCATCAGCCCCAGTGCGTTCTGCAGCCCGATCGTTGGTTGAGTCTGCAACCAAAGCATGGAGATGCAAATTTCCTTATTCAAACATTGATGACTGTGCTGTTGTGATCCTCTTCCTCGATTCGAACTCGAACGTTATGGCGTCGGAGACAAATATTTAA 1185 45.23 MGSCLSTGGMRAIPGAPVSPVLVARKEKHSEIELKSENSVLEPQSEATVHRIPGRMFLNGSTEVASLHTQQGKKGMNQDAMIVWENFGSRTDTFFCGVFDGHGPNGHLVAKRVRDSLPLKLTAHWEANSSNDGISKELSCKTERVNYEDSALGTVLEESSSPIDRKGTGNHPEISQKLKESFLKAFKIMDGELRMQPSIDCFCSGTTAVALVKQGRDLVIGNVGDSRAVLGTRDKDNSLLAVQLTIDLKPDVPAEAERILKCKGRVFAHRDEPEVARVWLPNNDSPGLAMARSFGDFCLKDFGLISVPELSYRFLTEKDEFIVLATDGIWDVLSNKEVVDIVASAPVRSAARSLVESATKAWRCKFPYSNIDDCAVVILFLDSNSNVMASETNI 394
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 12315767 12319193 + MC06g1130 Mch6g1401 690848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g1401 394 SUPERFAMILY PP2C-like 63 383 IPR036457 -
Mch6g1401 394 CDD PP2Cc 64 381 IPR001932 -
Mch6g1401 394 SMART PP2C_4 53 379 IPR001932 -
Mch6g1401 394 PANTHER PROTEIN PHOSPHATASE 46 380 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Mch6g1401 394 Pfam Protein phosphatase 2C 170 347 IPR001932 -
Mch6g1401 394 Gene3D - 59 383 IPR036457 -
Mch6g1401 394 ProSiteProfiles PPM-type phosphatase domain profile. 64 381 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g1401 Mch-Chr6:12315767 Mch8g2467 Mch-Chr8:27594408 5.18E-185 dispersed
Mch6g1401 Mch-Chr6:12315767 Mch4g0169 Mch-Chr4:1134981 1.49E-128 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g1401 - - - 0.0