Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g1473 AGAGTAAAAATATTTACACACGAAGAACTTGAACAAGCAACGGATAACTACAACGAAAGTAGATTTCTTGGTCAAGGAGGGTATGGCACAGTTTACAAAGGAATGCTCAATGACAACACTATTGTTGCAATCAAAAGGTCAAACCAAATTGAAGCAAACTGGATCGACCAATTCATTAATGAAGTCATTATACTTTCTCAAATTAACCACAGAAACATTGTTAGGCTTCTGGGTTGTTGTTTAGAAACTGAGCATCCGTTGCTGGTTTATGAATTTGTTTCGAATGGGACGCTTTCTCACCACATTAACCAGAAAGATCATGGAGAATCACCTTCTCTTTCTTGGGAAACTCGTCTAAGAATTGCATCTGAAGTTGCAGGAGCTATATCTTACATGCATTCTACGGCTTCAACTCAAATTTTTCACAAAGATATCAAGTCTTTAAATATACTTTTGGATGACAATTATCATACAAAAGTTTCTGATTTTGGAACATCAAGATTTGTGTCAAGTGATCAGTCTCACCTTACTACGAAAGTGCAAGGAACTTTTGGATACATTGATCCTGAGTACTTCAGATCAAGTCATTACACTGAAAAAAGTGACGTTTATAACTTTGGAGTCTTAATGGTAGAGCTTTTAACTGGAAAGTCACCCGTCACATTTGCAAAACATGAAGGCAGGAATCTATTAGAATACTTCATTTCATTGGAAAAGGCAAATCAACTTGTTGAAATTCTAGATATTGCAGTAGCCAAGGAAGAAAAGATGGAGGTTGTTAATGCTGTCGCAAAACTTACAACTAAATGTTTAAGATCCAATGGGAAAGAGAGGCCTACCATGAAACATGTATATTTGGAACTAGAAAGATCGAGGAAGCCTCAAAATTCAACTAATGAAAGCAACTCAAAAGTACTTAGAAAGCAACAAAGAAACACTAAAAATGATCAAGAGAAGGAAGCAAAGCTTGATGAATTTGCAATTTTTTCTTCATGTCATGCTCTTCCTCTAATCATCCTCTTCCTAATTTCTCTCTTTCCCTATCAATCCTTTTCCCAACAGTCGTATTTGGGAAAGGAGACGAGCTGTTCTATCAACAACAATTCGACGCCACAAGAATACGTGTGCACTGATTCTATTTACTCATGTGATTCTTATTTTGCCTTCAAATATGGTGCTCAATTTGATGCCTTTTATTACTTCAATATAACATTAAGGAACAATAATAATTTGTCTATTGCTCAGGTGTGGTCATGTTCATGTTTTGGTCATTCCTATCAATATATCATCGACTACACTATTAAAAGTGGTGATAGTTATGAAAAGATAGCGTATGATATTTTTCAAGGCTTGACGAGCTGTTCGGCGTTGAAAAATAAGAACGACGACTATCCCCTTAATAGTACTGCAGCGATAGGCAGAAGGCTCGAAGTTCCACTGCGATGTGCTTGTCCTACCAAAGCTCAAAATGCTAGTAGGATTGACAACTTGGTTGTGTATATGCTGCAACTAAATGAGACCATTGGATCCGTGGCGAGGGCTTTTGGGGTTGAGGAGAAAAGCGTGTTGGAAGCGAATATGCTTTCAAATTGGAGCCACATATATCCATTTACGCCTATTTTGGTTCCATTGGCATGTTGTTTCTTTTGCGGATGCAAAGGAAATCAACTACTTCTCAAGAAAAGAAGACGCAAACTTTATAAGAAAAAGTTTTTCAAACAAAATGGTGGCTTCTTATTGCAGCAGAAGCTACTTGAAGATAGTGAAAGAGTAAAAGTGTTTACAGAGGAAGAACTTGAACAAGCAACAGATAACTACAGTGACAGTAGATTACTTGGTCAAGGAGGATATGGCACGGTTTATAAAGGGATGCTCCGTGATAACACTACTGTTGCAATCAAAAGGTCAAAGCAAATCGAGACAAGCTGGATCGAACAGTTCATCAATGAAGTAATTGTCCTTTCTCAAATTAACCACAGAAATATTGTTAGGCTTCTGGGTTGTTGTTTAGAAACTGAGTTTCCGTTGTTAGTTTATGAATTTGTTCCTAATGGGACGCTTTCGCACCATATTCACGAGGAAAATCTTGAAGATTCACCTCTTTCATGGGAAGCTCGTCTTAGAATCGCTTCTGAAGTTGCAGGAGCTATATCTTACATGCATTCTGCTGCTTCAATTCCTATCTATCACAGAGATATCAAATCTTTAAACATACTTTTGGATGATAACTTTAGTGCAAAAGTTTCTGATTTTGGAACATCTAGATTTGTGTCATGTGATCAATCACATCTCACTACGAAAGTGTTGGGAACTTTTGGATATATAGATCCGGAGTACTTCAGATCAAGTCAATACACTGAAAAGAGTGACGTATATAGCTTTGGAGTATTAGTGGTGGAACTTTTAACTGGGAAGCTACCGGTTTCTTTTGCAAGGGATGATGGTAGAAATCTGTTAGATCATTTCATTTCATTGGTAAAGACTGATCAGCTTATCGAAATTTTAGATTTTATAGTAGCCACAGAAGAAATTATGGACGTTGTTAACCATGTTGCTACACTTGCCACAAAATGTTTAAGATCAAATGGGAAGGAAAGGCCAACGATGAAACAAGTATATTTGGAACTAGAAGGA 2634 37.02 RVKIFTHEELEQATDNYNESRFLGQGGYGTVYKGMLNDNTIVAIKRSNQIEANWIDQFINEVIILSQINHRNIVRLLGCCLETEHPLLVYEFVSNGTLSHHINQKDHGESPSLSWETRLRIASEVAGAISYMHSTASTQIFHKDIKSLNILLDDNYHTKVSDFGTSRFVSSDQSHLTTKVQGTFGYIDPEYFRSSHYTEKSDVYNFGVLMVELLTGKSPVTFAKHEGRNLLEYFISLEKANQLVEILDIAVAKEEKMEVVNAVAKLTTKCLRSNGKERPTMKHVYLELERSRKPQNSTNESNSKVLRKQQRNTKNDQEKEAKLDEFAIFSSCHALPLIILFLISLFPYQSFSQQSYLGKETSCSINNNSTPQEYVCTDSIYSCDSYFAFKYGAQFDAFYYFNITLRNNNNLSIAQVWSCSCFGHSYQYIIDYTIKSGDSYEKIAYDIFQGLTSCSALKNKNDDYPLNSTAAIGRRLEVPLRCACPTKAQNASRIDNLVVYMLQLNETIGSVARAFGVEEKSVLEANMLSNWSHIYPFTPILVPLACCFFCGCKGNQLLLKKRRRKLYKKKFFKQNGGFLLQQKLLEDSERVKVFTEEELEQATDNYSDSRLLGQGGYGTVYKGMLRDNTTVAIKRSKQIETSWIEQFINEVIVLSQINHRNIVRLLGCCLETEFPLLVYEFVPNGTLSHHIHEENLEDSPLSWEARLRIASEVAGAISYMHSAASIPIYHRDIKSLNILLDDNFSAKVSDFGTSRFVSCDQSHLTTKVLGTFGYIDPEYFRSSQYTEKSDVYSFGVLVVELLTGKLPVSFARDDGRNLLDHFISLVKTDQLIEILDFIVATEEIMDVVNHVATLATKCLRSNGKERPTMKQVYLELEG 878
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 13823753 13868297 - MC06g1167 Mch6g1473 690920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g1473 878 Coils Coil 585 605 - -
Mch6g1473 878 Gene3D Transferase(Phosphotransferase) domain 1 682 878 - -
Mch6g1473 878 CDD STKc_IRAK 612 878 - -
Mch6g1473 878 FunFam Wall-associated receptor kinase 2 579 681 - -
Mch6g1473 878 Gene3D Phosphorylase Kinase; domain 1 580 681 - -
Mch6g1473 878 ProSiteProfiles Protein kinase domain profile. 17 288 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g1473 878 ProSiteProfiles Protein kinase domain profile. 606 878 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g1473 878 MobiDBLite consensus disorder prediction 288 317 - -
Mch6g1473 878 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 383 878 IPR045274 GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0007166(PANTHER)|GO:0007166(InterPro)
Mch6g1473 878 ProSitePatterns Protein kinases ATP-binding region signature. 23 45 IPR017441 GO:0005524(InterPro)
Mch6g1473 878 Gene3D Phosphorylase Kinase; domain 1 1 92 - -
Mch6g1473 878 FunFam Wall-associated receptor kinase 2 1 92 - -
Mch6g1473 878 SUPERFAMILY Protein kinase-like (PK-like) 3 288 IPR011009 -
Mch6g1473 878 Pfam LysM domain 503 543 IPR018392 -
Mch6g1473 878 Pfam LysM domain 432 479 IPR018392 -
Mch6g1473 878 Pfam Protein kinase domain 17 284 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g1473 878 Pfam Protein kinase domain 606 872 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g1473 878 CDD STKc_IRAK 23 290 - -
Mch6g1473 878 SUPERFAMILY Protein kinase-like (PK-like) 590 875 IPR011009 -
Mch6g1473 878 ProSitePatterns Protein kinases ATP-binding region signature. 612 634 IPR017441 GO:0005524(InterPro)
Mch6g1473 878 SMART serkin_6 606 874 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g1473 878 SMART serkin_6 17 286 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g1473 878 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch6g1473 878 FunFam Wall-associated receptor kinase 2 93 312 - -
Mch6g1473 878 FunFam Wall-associated receptor kinase 2 682 878 - -
Mch6g1473 878 Gene3D Transferase(Phosphotransferase) domain 1 93 318 - -
Mch6g1473 878 ProSitePatterns Serine/Threonine protein kinases active-site signature. 728 740 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g1816 Mch-Chr4:21066059 Mch6g1473 Mch-Chr6:13823753 4.93E-109 dispersed
Mch5g1679 Mch-Chr5:17570331 Mch6g1473 Mch-Chr6:13823753 1.14E-80 dispersed
Mch6g1109 Mch-Chr6:8104667 Mch6g1473 Mch-Chr6:13823753 3.08E-85 dispersed
Mch6g1470 Mch-Chr6:13719493 Mch6g1473 Mch-Chr6:13823753 2.45E-260 dispersed
Mch6g1473 Mch-Chr6:13823753 Mch6g1475 Mch-Chr6:13907016 2.45E-243 dispersed
Mch6g1473 Mch-Chr6:13823753 Mch6g1474 Mch-Chr6:13886124 2.45E-243 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77497 PF00069 Pkinase 2.30E-51 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g1473 - - - 0.0