Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch6g1633 | ATGACCCCTATGTTGAGCTACGTTGTGTCCAAATGGGAAGCGTTATCCACTTCCGATCATGCCTCTGTGGTTTCCATCAACTTATTTGTGGCACTTCTCTGTGCTTGTATCGTTATTGGTCATCTTCTTGAGGAGAACCGGTGGATGAATGAGTCCATCACTGCCCTCTTGATTGGTCTGTGTACTGGAGTCATTATTTTACTGGTCAGTGGTGGGAAAAGTTCGCATCTGATGCTATTTGACGAAGACACATTCTTTATTTATCTTCTGCCACCTATTATATTCAATGCTGGGTTTCAGGTGAAAAAGAAGCAGTTCTTTGTTAACTTTATGACAATTATGCTATTCGGTGCAATTGGTACATTAATCTCTTGTTTAATCATCTCAGTAGGTGCTTTGCAGTTATTTAAGAAAATGGATGTTGGATCGCTGGATATTGCTGATATTTTAGCAATTGGAGCAATATTTGCTGCAACAGATTCTGTATGCACATTGCAGATATTAAATCAGGATGAAACACCTCTACTTTACAGTCTAGTATTCGGGGAGGGTGTAGTAAATGATGCTACATCTGTGGTGCTTTTCAATGCAATCCAGAGCTTAGACCTTAGTAAATTTGATCCAAAAGTTGCTTTACATTTTATTGGGAGCTTCTTTTATTTGTTTTCCTTGAGCACCCTACTTGGAGTATTTGTTGGGCTGCTGAGTGCTTACACAATCAAAAAGTTGTACTTTGGCAGGCACTCAACAGATCGTGAGGTGGCTCTAATGATGCTCATGGCGTACCTTTCATATATGCTGGCTGAATTATTAGATTTAAGTGGCATTCTCACGGTGTTCTTTTGTGGGATTGTAATGTCTCACTATACCTGGCATAATGTGACCGAGAGTTCAAGAGTTACCACTAAGCACGCTTTCGCTACCTTATCCTTCATTTCCGAGACCTTTATCTTTGTTTATGTTGGCATGGATGCGTTGGACATCGAGAAGTGGAGCTTTGTTAGTGATAGTCCGGGGACCTCAGTTTCTGTGAGTGCAATATTACTAGGCCTGGTTATGGTTGGAAGAGCGGCTTTTGTTTTCCCGCTCTCATTTTTATCCAACTTAGCTAAAAAATCGCCGGATCAGAGAATTACCTTGAGGGAACAAATTATAATTTGGTGGGCTGGTCTCATGAGAGGGGCTGTCTCCATTGCTCTGGCTTATCATCAGTTTACAAGAGCAGGACACACTGAATTGCGAGGGAACGCAATGATGATCACTAGTACCATAACTGTTGTCCTTTTCAGCACAATGGTGTTTGGGTTATTGACCCAGCCTCTTATAAAGTGGTTGATACCTCACCCAAAACACACCTCCAGCATGCTATCAGATCCCGCGACTCCAAAATCATTCTCGGTACCGCTTCTCGGAAGTGCCCAGGATTCGGAGCTTGATCTTGACGGCTCCACTATTCCTCGTCCAAGCAGTATACGCGCACTCCTTGCCACCCCTACACACACCGTGCATCGCTACTGGCGAAAGTTTGACGATGCCTTCATGCGCCCAATGTTCGGGGGCAGGGGATTTGTTCCCTTTGTTCCAGGATCGCCAACCGAGAGGAGTGGACACTGA | 1614 | 43.68 | MTPMLSYVVSKWEALSTSDHASVVSINLFVALLCACIVIGHLLEENRWMNESITALLIGLCTGVIILLVSGGKSSHLMLFDEDTFFIYLLPPIIFNAGFQVKKKQFFVNFMTIMLFGAIGTLISCLIISVGALQLFKKMDVGSLDIADILAIGAIFAATDSVCTLQILNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSLDLSKFDPKVALHFIGSFFYLFSLSTLLGVFVGLLSAYTIKKLYFGRHSTDREVALMMLMAYLSYMLAELLDLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFISETFIFVYVGMDALDIEKWSFVSDSPGTSVSVSAILLGLVMVGRAAFVFPLSFLSNLAKKSPDQRITLREQIIIWWAGLMRGAVSIALAYHQFTRAGHTELRGNAMMITSTITVVLFSTMVFGLLTQPLIKWLIPHPKHTSSMLSDPATPKSFSVPLLGSAQDSELDLDGSTIPRPSSIRALLATPTHTVHRYWRKFDDAFMRPMFGGRGFVPFVPGSPTERSGH | 537 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 18003274 | 18010537 | - | MC06g1244 | Mch6g1633 | 691080 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch6g1633 | 537 | Gene3D | - | 145 | 197 | - | - | |
| Mch6g1633 | 537 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 16 | 527 | IPR018422 | GO:0005886(PANTHER)|GO:0006812(InterPro)|GO:0015385(InterPro)|GO:0015385(PANTHER)|GO:0015386(PANTHER)|GO:0016020(InterPro)|GO:0051453(PANTHER)|GO:0071805(PANTHER)|GO:0090333(PANTHER)|GO:0098719(PANTHER)|GO:1902600(InterPro) | |
| Mch6g1633 | 537 | NCBIfam | sodium/hydrogen exchanger 3 | 24 | 448 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Mch6g1633 | 537 | PRINTS | Na+/H+ exchanger signature | 84 | 95 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Mch6g1633 | 537 | PRINTS | Na+/H+ exchanger signature | 98 | 112 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Mch6g1633 | 537 | PRINTS | Na+/H+ exchanger signature | 113 | 121 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Mch6g1633 | 537 | PRINTS | Na+/H+ exchanger signature | 153 | 163 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Mch6g1633 | 537 | Pfam | Sodium/hydrogen exchanger family | 31 | 444 | IPR006153 | GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch11g1230 | Mch-Chr11:8702967 | Mch6g1633 | Mch-Chr6:18003274 | 1.38E-209 | dispersed | |
| Mch6g1633 | Mch-Chr6:18003274 | Mch9g0801 | Mch-Chr9:5992947 | 8.64E-244 | dispersed | |
| Mch6g1633 | Mch-Chr6:18003274 | Mch7g1138 | Mch-Chr7:15254525 | 4.71E-276 | transposed |
Pathway information