Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g1662 ATGAAACACATTTTCAAGAAGTTCCACATAGGAAGCAACCACGACCCCAATCGGTCCAACGAGAATCCGTCCCCTGCACCGTCCTCATCATGTGTTTCCAACGATAATCGGCCTCCTCCCGCCGCCCACACCTCCGGCGACTCTCCGTCCAGTCCATCGTCGTCACCGTCTCCAGGGGGTGGAAGCACCACTCCGGCTCCGGTGCCTCCCAATCGCTCTGATTACTTTTCTTCCGAGGAGGAGTATCAGGTTCAGCTTGCCCTAGCTATTAGCGCCTCCAATTCGGACTTCCGGGATGATCCGGAGAAGGATCAAATTCGAGCTGCCACGCTTTTGAGCTTGGGAAATCATAGCCTTGACTCCACTGCCAGGGACCAGGGAGATGCAGCTGAGGCGCTCTCGAGGCAATATTGGGAATACAATCTGCTTGACTATGAAGAAAAAGTGGTCAATGGGTTTTATGATGTCCTCTCTACGGATTCAGCAGTCCAAGGAAAAATCCCATCTCTATCTGATATTGAGGCAAGCTTTGGTAGTTCTGGCTTTGAAGTCGTGATGGTCAATATGACTGTTGATCCTGCACTAGAAGAGCTAGTGCAAATTGCTCAATGTATTGCAGATTGCCCTGGCACCGAGGTCAGAGTTTTGGTTCAGAGGCTTGCCGAGCTTGTTATGGGACACATGGGCGGACCTGTTAAGGATGCCAATTTTATGCTTGCAAGGTGGATGGAAAGAAGCACAGAGTTGAGGACTTCTCTTCACACCAGTGTACTGCCTATTGGTTCCATTAATATTGGCCTCTCAAGACATCGTGCATTGCTTTTCAAGGTGTTAGCTGACAGTATCAAGATGCCTTGTAGGCTTGTTAAAGGTAGTCACTATACTGGTGTTGAAGAAGATGCTGTCAACATTATAAAGCTGGAGGATGAAAGGGAGTTTTTGGTTGATCTAATGGCAGCTCCTGGAACGCTTATACCAGCAGATATATTAAGTGCAAAGGATACTACTACCTTGAAGCCTTACAACCCGAATATAAGCAAAATTCCTTCTCTCCATTCCTCCAATGATGTTGGAATTTCTTCTGGAAAACCAATGTCATCACTTGATGAAGGCAGCAGTCAAAACCTTGAAGCTGAGGCTGGCTTGCTGATGGATGGAAAACCCGGCTATGGAAGGACAGAATCTGTGCCGTCAAGCTCAGGTACTGGAACTTCATGGTACAAAGGGGTCCATTCTGGTGATAGTAATGTTAGACTGAATGTCAATGTAGTTCCGTTTGGCCAAAGCTCCGAGGATTCCAAAAATCTGTTTGCAGATCTTAATCCGTTCCAAATAAAAGGAACTGGAAAAAGTTTCGTACATAACAAATCCTCTGATAATAAAACTGAGGAGCTCCAGAAACCTACTATTGGGCATCCCCCTGTACCATTGTGGAAAAATCGGCATGCTTTCAATGCAGTTCCCCAGAAAAAGGAATATGATTATATGGAGGGCCGTTTTCCAAGAATTAGTCGTGGATCTAATGATCAAAATGTGGCATTGTCTTCTTCTGCCAGCTCTACCGTCTTTGAAAATGTCAATCCTGGTGGTTCAGGAACATCAACTGGCTCGAGTATATCAGTTAGAAGTGCTGAAGTTGGAAGTTCTTCATCTAATGTGAACTCACAGTCAACATCTGCCATGGTTAAGCCTAATATTTTACCTTCGATTGAGGAACAGAACATAAAGCCCAATGGAGAACATTCTGGAAGTATAGACATGCAGGATGAAATGGTCAATACTGTTGATGAACGCGATAATTTAATCAGATTTGATAACCGTAGAAAGTTCACATATGACAGATCCGTTGGGACCAATTTGATACTGAAGGATCCGGGAAGTCCCAGCCTGTCAATTGATCCAAGTTATAATAGGTTTGAGCAAGTTTATGATGATGTGGATGTAGGTGAATGTGAAATCCAGTGGGAAGACCTTATTATTGGTGAAAGAATTGGACTAGGGTCGTATGGAGAAGTCTACCATGCTGATTGGAATGGCACAGAGGTTGCGGTGAAGAAATTCTTAGACCAGGATTTTTCTGGCGCTGCTTTAGCTGAGTTCAAAAGAGAAGTACTGATAATGCGGCAGCTACGTCATCCAAATGTTGTTCTTTTTATGGGTGCTGTCACTCGTCCTCCTAACCTTTCCATTGTTACCGAGTTTCTTCCGAGAGGAAGCTTGTACCGGATCATTCACCGCCCACATTGTCAAATTGATGAAAAGCGCAGAATAAAAATGGCCCTCGATGTGGCAAGGGGTATGAATTGCTTGCATACAAGTAATCCAACAATTGTTCACCGAGATCTGAAGTCACCCAATCTTTTGGTTGATCAGAACTGGAATGTGAAGGTGTGTGATTTTGGGTTGTCACGCCTGAAGCACAACACATTTTTGTCATCGAAATCAACTGGAGGAACGCCTGAGTGGATGGCACCAGAGGTTCTCCGGAATGAGCCTTCAAATGAAAAGTGCGATGTTTATAGCTTTGGAATCATTCTATGGGAACTTGCTACTTTGAGACTGCCTTGGAGCGGGATGAATCCTATGCAAGTTGTTGGTGCAGTAGGTTTCCAGAATCGACGACTCGAAATACCAAAGGAAGTGGATCCCGTGGTTGGGAGGATAATTTGGGAATGCTGGCAAACCGACCCGAACTTGCGCCCCTCGTTTGCTCAATTAGCCATTGCTCTGAAGCCACTGCAGCGGCTTGCCCTGCCCCCACATTCAGACCAGCCAAGCTCATCGCTGCTGCAAGAGATTTCTGTAAATTCTACACCTTGA 2820 45.5 MKHIFKKFHIGSNHDPNRSNENPSPAPSSSCVSNDNRPPPAAHTSGDSPSSPSSSPSPGGGSTTPAPVPPNRSDYFSSEEEYQVQLALAISASNSDFRDDPEKDQIRAATLLSLGNHSLDSTARDQGDAAEALSRQYWEYNLLDYEEKVVNGFYDVLSTDSAVQGKIPSLSDIEASFGSSGFEVVMVNMTVDPALEELVQIAQCIADCPGTEVRVLVQRLAELVMGHMGGPVKDANFMLARWMERSTELRTSLHTSVLPIGSINIGLSRHRALLFKVLADSIKMPCRLVKGSHYTGVEEDAVNIIKLEDEREFLVDLMAAPGTLIPADILSAKDTTTLKPYNPNISKIPSLHSSNDVGISSGKPMSSLDEGSSQNLEAEAGLLMDGKPGYGRTESVPSSSGTGTSWYKGVHSGDSNVRLNVNVVPFGQSSEDSKNLFADLNPFQIKGTGKSFVHNKSSDNKTEELQKPTIGHPPVPLWKNRHAFNAVPQKKEYDYMEGRFPRISRGSNDQNVALSSSASSTVFENVNPGGSGTSTGSSISVRSAEVGSSSSNVNSQSTSAMVKPNILPSIEEQNIKPNGEHSGSIDMQDEMVNTVDERDNLIRFDNRRKFTYDRSVGTNLILKDPGSPSLSIDPSYNRFEQVYDDVDVGECEIQWEDLIIGERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGAALAEFKREVLIMRQLRHPNVVLFMGAVTRPPNLSIVTEFLPRGSLYRIIHRPHCQIDEKRRIKMALDVARGMNCLHTSNPTIVHRDLKSPNLLVDQNWNVKVCDFGLSRLKHNTFLSSKSTGGTPEWMAPEVLRNEPSNEKCDVYSFGIILWELATLRLPWSGMNPMQVVGAVGFQNRRLEIPKEVDPVVGRIIWECWQTDPNLRPSFAQLAIALKPLQRLALPPHSDQPSSSLLQEISVNSTP 939
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 18444872 18467058 - MC06g1252 Mch6g1662 691109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g1662 939 Pfam Ethylene-responsive protein kinase Le-CTR1 130 325 - -
Mch6g1662 939 FunFam PAS domain-containing protein tyrosine kinase family protein 736 923 - -
Mch6g1662 939 SUPERFAMILY Protein kinase-like (PK-like) 648 927 IPR011009 -
Mch6g1662 939 MobiDBLite consensus disorder prediction 1 79 - -
Mch6g1662 939 Pfam Protein tyrosine and serine/threonine kinase 660 907 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch6g1662 939 SMART serkin_6 658 913 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g1662 939 ProSitePatterns Serine/Threonine protein kinases active-site signature. 777 789 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch6g1662 939 ProSitePatterns Protein kinases ATP-binding region signature. 664 686 IPR017441 GO:0005524(InterPro)
Mch6g1662 939 MobiDBLite consensus disorder prediction 15 79 - -
Mch6g1662 939 FunFam Serine/threonine-protein kinase isoform 1 649 736 - -
Mch6g1662 939 PRINTS Tyrosine kinase catalytic domain signature 732 745 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch6g1662 939 PRINTS Tyrosine kinase catalytic domain signature 837 859 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch6g1662 939 PRINTS Tyrosine kinase catalytic domain signature 771 789 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch6g1662 939 PRINTS Tyrosine kinase catalytic domain signature 881 903 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch6g1662 939 PRINTS Tyrosine kinase catalytic domain signature 818 828 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch6g1662 939 Gene3D Phosphorylase Kinase; domain 1 651 735 - -
Mch6g1662 939 MobiDBLite consensus disorder prediction 524 560 - -
Mch6g1662 939 CDD STKc_MAP3K-like 664 906 - -
Mch6g1662 939 Gene3D Transferase(Phosphotransferase) domain 1 737 918 - -
Mch6g1662 939 ProSiteProfiles Protein kinase domain profile. 658 916 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g1662 939 MobiDBLite consensus disorder prediction 920 939 - -
Mch6g1662 939 PANTHER SERINE-THREONINE PROTEIN KINASE 72 911 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Mch6g1662 939 MobiDBLite consensus disorder prediction 449 477 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g1592 Mch-Chr3:17863029 Mch6g1662 Mch-Chr6:18444872 6.66E-197 dispersed
Mch5g1658 Mch-Chr5:17396094 Mch6g1662 Mch-Chr6:18444872 7.35E-142 dispersed
Mch6g1662 Mch-Chr6:18444872 Mch7g1239 Mch-Chr7:15937435 8.23E-104 dispersed
Mch6g1662 Mch-Chr6:18444872 Mch1g0900 Mch-Chr1:12340518 2.98E-142 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77506 PF07714 PK_Tyr_Ser-Thr 6.10E-62 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g1662 - - - 0.0