Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g1702 ATGATGGCTGGAAGTAGTGAAATCAATCTCAACGAGTCGAGGATGGTGGTTCCACTAAATACCTGGGTTCTCATTTCCAACTTTAAGTTGGCTTACAATCTTCTTCGTCGTCCTGATGGGACCTTCAATCGGCATTTGGCAGAGTTTCTTGACCGGAAAGTCCCAGCCAATGCTAACGCTGTTGATGGGGCTTTCTCGTTTGATGTCATTATCGATCGCGCTACGAGCCTCCTTTGTAGAATATATCGCCCTGCCAATGGAGGCGAACCTCAGACTACAAACATTGTTGATCTTGAGAAGCCTGTGGATTCTGAGGTCGTGGTCCCTGTTATTGTTTTCTTTCATGGTGGAAGCTTTGCGCATTCGTCTGCTAATAGTGCTATCTACGACACTCTATGTCGTCGATTGGTCAGTCTTTGCAAGGCTGTTGTTGTCTCTGTGAATTACAGGCGTGCACCTGAAAATCGGTATCCATGTGCTTATGATGATGGATGGACTGCACTCAAGTGGGTACATTCGAGGTCATGGCTTCAAAGTAAAGACTCGAAAACGTACATTTATTTGGCTGGCGATAGTTCGGGTGGAAACATTGTACACCATGTTGCATCAAGAGCAATAAAGTCGGGAATCGAAGTATTCGGCAATATACTTCTTAATCCAATGTTTGGAGGACAGGAAAGAACTAAATCTGAGATTCGGTTGGATGGAAAGTATTTCGTCACCATCCGGGATAGAGACTGGTATTGGAGGGCCTTCCTCCCTGAAGGAGAAGATAGAGACCATCCAGCATGTAATCCCTTCGGCCCGAGGGGTAATAGCCTCGAAGGAATCAAGTTCCCGAAGAGCCTCGTCGTGGTGGCTGGTTTAGATCTCGTCCAGGACTGGCAATTGGCTTATGCCAAAGGGCTTGAGAAGGATGGCCAAGAAGTGAAACTTTTGTATCTTGAGCAGGCAACCATTGGCTTCTATTTGCTACCGAATACCGATCACTTCTATACCGTCATGGACGAGATAAGTGAATTTGTGAGATCTGACTATTAA 1041 45.92 MMAGSSEINLNESRMVVPLNTWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANAVDGAFSFDVIIDRATSLLCRIYRPANGGEPQTTNIVDLEKPVDSEVVVPVIVFFHGGSFAHSSANSAIYDTLCRRLVSLCKAVVVSVNYRRAPENRYPCAYDDGWTALKWVHSRSWLQSKDSKTYIYLAGDSSGGNIVHHVASRAIKSGIEVFGNILLNPMFGGQERTKSEIRLDGKYFVTIRDRDWYWRAFLPEGEDRDHPACNPFGPRGNSLEGIKFPKSLVVVAGLDLVQDWQLAYAKGLEKDGQEVKLLYLEQATIGFYLLPNTDHFYTVMDEISEFVRSDY 346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 19240645 19243498 - MC06g1272 Mch6g1702 691149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g1702 346 SUPERFAMILY alpha/beta-Hydrolases 61 343 IPR029058 -
Mch6g1702 346 FunFam Gibberellin receptor GID1 2 344 - -
Mch6g1702 346 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 111 127 IPR002168 GO:0016787(InterPro)
Mch6g1702 346 Pfam alpha/beta hydrolase fold 111 323 IPR013094 GO:0016787(InterPro)
Mch6g1702 346 Gene3D alpha/beta hydrolase 1 344 IPR029058 -
Mch6g1702 346 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 186 198 IPR033140 -
Mch6g1702 346 PANTHER ARYLACETAMIDE DEACETYLASE 37 330 IPR050466 GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0009939(PANTHER)|GO:0010325(PANTHER)|GO:0010331(PANTHER)|GO:0048444(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g1702 Mch-Chr6:19240645 Mch9g0822 Mch-Chr9:6154503 2.41E-180 dispersed
Mch6g1702 Mch-Chr6:19240645 Mch11g0271 Mch-Chr11:1711730 8.42E-41 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g1702 K14493 - csv:101213253 640.958