Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch6g1798 | ATGGAACCCAGCTCCAATTTCCTTCAAAATCCCATAGATTCTCTGAATTTCTTGCTCCCATGGCGGTGGATTAACAATATCAATAATGGAGATAACCAACACCAACCGCGCCTTCTTTCCACCTTCTTCATCGCAGCTTTTCTACTTCTTTTGTTCCTCAAAATTCGACGGCGGCCGCGGCGCTTCCCTCTTCCGCCGGGTCCACGTGGCGTTCCACTACTCGGAAATCTCCCTTCTATGAAACCACAGCTTCACACTTACTTCACCGAGCTCGGTCAAAAGTACCCAATCGTAAAGCTCCAACTCGGCCACAAAATCTGCATAGTCATCAACTCGGCCAGCGTGGCACGTGAGGTTCTCAAGGACCATGACGTCACATTCGCCAACCGTGACGTTCCCATCGCTGGCAAGGCCTCCTCGTACGGTGGCCGTGACATACTTTGGAGTCCATATGGAGCCGAGTGGCGGATGTTGCGCAAAATAAGTGTTCTCAAAATGCTTGGAACCGCCGCCTTGGACGCCGTCGCCGCCTATGAAATCCGGCGAAGAGAGGTCAGAAACAGGGTGCGTTACTTGTATACTCAAGTTGGGTCTTCCGTCGATGTGGGAGAGCAAGGTTTCGTGACGATACTCAATGTCATCACCGCCATGATGTGGGGCGGGGCGGCGGTGGACGGAGAATCGAGGGAGAGCATTGGTGCCGGCGCGGCGGAGCTGAGAGAGACGGCGGCGGAGATGGTACACCTATTGATGGTGCCCAATATCTCCGATTTTTTTCCCAAATTGGCACGCTTTGATTTTCAAGGCATAGAGAAGCGAATGCGAGAGTACTGCCAAAGATTTGACGAATTCTTTGATAATTTGATCGATAAAAGACTGGAAATTGACAATGGAAATGGAGAGAAAAATGATTCCTTGCAGTTCTTGCTCCAGCACAAAGATGAAGGGGATTTCAAAGTGCCGTTCACGATCAACCATCTCAAAGCTCTGCTCATGGACATGATTTTCGGCGGGACAGATGCACCGTCAAGTACAATAGAGTTTGCAATGGCAGAGATAATGAAGAACCCGCAAGTTCTAAAAAAGGCTCAACAAGAATTATCTGCTGTGGTTGGAGAAGAGAATGTTGTAGAAGAATCCCACATCCAAAATCTACCATATCTCCGAGCCATAATGAAAGAAACCCTACGCATTCACCCGGCGTTGCCGCTGCTCGCCCCCCACAGCCCCAGCAAGAGCACCGTCGTCTCCGGCTACACAATCCCAAAGGGATCTCAAGTTTTAATCAACGCGTGGGCGATTCACCGAGACCCGTACTCATGGGAGAAGCCATTGGAGTTCAAGCCAGAGAGGTTTCTGAACAATAATTGGGATTACAATGGGAGTGATCTCTCTTACATTCCGTTCGGATACGGCAGAAGAATGTGTGCAGGGACGGCCATGGCCGAGAGGATGGTTCTGTATTTGGTTGCTACGATGTTGCACTCGTTCGATTGGAAATTGGAAAGAGGGGAGAATATGGATATTTTCGAGAATTTTGGGACTGTGTTGAAGAAGAAGACGCCTCTTGTTGCAATTCCCACGCCAAGATTGGCTGACTTATCTCTCTATCAATTGAAGACCTTGAACATGCTGTCAAAATTTCATCTATATCCGTACAAATATTTTTCCTCTCACTCGTGGGCGCTCGATTTTCACCTTCTTGGCCGGATTTCTGGTTATTTATCTATATGTCAGATTTTGTCGGCGGCGCGTGCGCGCGGCGTTCCACTGCTCGGAAACCTCCCATTTCTCGAACCGGAGCTTCACACCTACTTCACGGAACTGGGCCGGAAATACGGCCCAATTGTAAAGCTTCAGCTCGGCAAGAAGGTGGGCGTAGTCGTCAATTCACCAACCGTGGCGCGTGAAGTGCTGAAGGATCACGACATCACGTTCGCCAATCGCGACGTTCCTCAGGCCGGAAAGGCCGCCACGTACGGCGGTTATGACATCACGTGGACCCCACACGGACCGGAGTGGCGGATGTTGAGAAAAGTGTGCGCCCTCAAGATGCTCAGCAACGCCACGCTGGACTCCGTCTACGACCTCCGCCGGCAAGAGGTCAGAAACACCGTCGCTCACCTGTACCGGCGGGCCGGGTCTCCTGTCAACATCGGAGAGCAGGGTTTTTTGACCGTTTTTAACGTTATCACGAGCATGTTGTGGGGTGGGGCGGTGGAGGGAGAGCAGAGGGACGGCCTGGCGGCGGAGTTCAGAGCGGCGGTGTCTGATCTGACGGAGCTGCTGATCAAGCCTAATGTGTCGGACTTTTTTCCGGGCCTGGCCCGGTTCGATCTCCAGGGTATTGAGAAGCAGATGCGGTCGAAGCTGGTCCCCAGATTCGATAACATC | 2394 | 51.59 | MEPSSNFLQNPIDSLNFLLPWRWINNINNGDNQHQPRLLSTFFIAAFLLLLFLKIRRRPRRFPLPPGPRGVPLLGNLPSMKPQLHTYFTELGQKYPIVKLQLGHKICIVINSASVAREVLKDHDVTFANRDVPIAGKASSYGGRDILWSPYGAEWRMLRKISVLKMLGTAALDAVAAYEIRRREVRNRVRYLYTQVGSSVDVGEQGFVTILNVITAMMWGGAAVDGESRESIGAGAAELRETAAEMVHLLMVPNISDFFPKLARFDFQGIEKRMREYCQRFDEFFDNLIDKRLEIDNGNGEKNDSLQFLLQHKDEGDFKVPFTINHLKALLMDMIFGGTDAPSSTIEFAMAEIMKNPQVLKKAQQELSAVVGEENVVEESHIQNLPYLRAIMKETLRIHPALPLLAPHSPSKSTVVSGYTIPKGSQVLINAWAIHRDPYSWEKPLEFKPERFLNNNWDYNGSDLSYIPFGYGRRMCAGTAMAERMVLYLVATMLHSFDWKLERGENMDIFENFGTVLKKKTPLVAIPTPRLADLSLYQLKTLNMLSKFHLYPYKYFSSHSWALDFHLLGRISGYLSICQILSAARARGVPLLGNLPFLEPELHTYFTELGRKYGPIVKLQLGKKVGVVVNSPTVAREVLKDHDITFANRDVPQAGKAATYGGYDITWTPHGPEWRMLRKVCALKMLSNATLDSVYDLRRQEVRNTVAHLYRRAGSPVNIGEQGFLTVFNVITSMLWGGAVEGEQRDGLAAEFRAAVSDLTELLIKPNVSDFFPGLARFDLQGIEKQMRSKLVPRFDNI | 798 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 20502090 | 20524929 | + | MC06g1342 | Mch6g1798 | 691245 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch6g1798 | 798 | FunFam | Cytochrome P450 76C4 | 56 | 526 | - | - | |
| Mch6g1798 | 798 | PRINTS | P450 superfamily signature | 390 | 401 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g1798 | 798 | PRINTS | P450 superfamily signature | 467 | 476 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g1798 | 798 | PRINTS | P450 superfamily signature | 337 | 354 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g1798 | 798 | PRINTS | P450 superfamily signature | 476 | 487 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g1798 | 798 | Gene3D | Cytochrome P450 | 584 | 797 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g1798 | 798 | PANTHER | OS08G0547900 PROTEIN | 23 | 538 | - | - | |
| Mch6g1798 | 798 | SUPERFAMILY | Cytochrome P450 | 587 | 788 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g1798 | 798 | PRINTS | E-class P450 group I signature | 476 | 499 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g1798 | 798 | PRINTS | E-class P450 group I signature | 326 | 343 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g1798 | 798 | PRINTS | E-class P450 group I signature | 91 | 110 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g1798 | 798 | PRINTS | E-class P450 group I signature | 346 | 372 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g1798 | 798 | PRINTS | E-class P450 group I signature | 389 | 407 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g1798 | 798 | PRINTS | E-class P450 group I signature | 466 | 476 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g1798 | 798 | PRINTS | E-class P450 group I signature | 115 | 136 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g1798 | 798 | PRINTS | E-class P450 group I signature | 430 | 454 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g1798 | 798 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 469 | 478 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch6g1798 | 798 | CDD | CYP76-like | 93 | 527 | - | - | |
| Mch6g1798 | 798 | Pfam | Cytochrome P450 | 588 | 789 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g1798 | 798 | Pfam | Cytochrome P450 | 65 | 521 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g1798 | 798 | Gene3D | Cytochrome P450 | 51 | 526 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g1798 | 798 | SUPERFAMILY | Cytochrome P450 | 65 | 530 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch6g1798 | Mch-Chr6:20502090 | Mch6g2598 | Mch-Chr6:27802202 | 7.56E-299 | dispersed | |
| Mch6g1796 | Mch-Chr6:20486592 | Mch6g1798 | Mch-Chr6:20502090 | 1.48E-73 | proximal |
Pathway information