Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g1811 ATGAAGCAAAAGGGCCACCGTCTTGTCTTCCCTTCTTTCCCTCTCAATTCGCAGCTCTCAACTCTCAACCCTTTCCCCTCCTGCAGGCTGCTGCTCCGACGCCGCCGTTCACCGCCGTGCGACTCCGATATGGGCGAAGCCGTCGTCAGTTGTGAGGATGTGAATGTGGATATCAGCCCCGGCATCGACGATATGGTGGCGGAAGCTCAAAGTGCGGATTCCCACAAACCAGACAAAGAAGGGGCTGGGATTAAGTGGGAGCGGTTCTTGCCCAAGATGATGCTCAGGGTCCTGCTCGTTGAAGCCGACGATTCCACCAGGCAGATTATTACTGCCCTTCTCCGCAAGTGCTGCTACAGAGTTGCTGCTGTTCCCGATGGCTTGAAAGCTTGGGAAATTCTCAAAGAAAGGCCCCGTAATGTAGACCTTATATTGGCGGAAGTTGAATTGCCATCAATCTCTGGATTTGCTCTACTAACTCTGATCATGGAGCATGAGACTTGCAAAAATATTCCTGTTATAATGATGTCATCTGAAGATTCTATCAGCACCGTTTACAAATGCATGATGAAAGGTGCTGCAGACTATCTTCTCAAGCCCCTAAGGAGAAATGAACTGAGAAATCTTTGGCAACATGTTTGGAGAAGACAAGCATCATCCAGTGTGAGAAATGACGTTCAAGAAAAGGTTGAAGTCACTTCAGAAAATGAGACTGCAAGCAATCACTCAACTGGTTATGTTGCTGGAGTCCAGAGGAATAACAAAAACATAGAGAAAGGGAGTGATACTCAGAGCTCTTGTACCAAGGTGGATTTCGAAGTTGGAAGTAGGATACAGGAATATTCACATCCGAGCCAGGGAAATGCCTCTCCGAAAGACTTCAGGCTACAGAAAGATGAACGTCACATCAATTTGAGTCAGAGATTGGCTATGCATGAAAACGAAACTGGAGGATTGGCAATGGGCTGCTATGTAAATGCTGATTTACCAATTACACTAAGCATGGGTCTTGAGCCAATGAATGATAGTAGAATAAGTCCTAGTATGGCTAATGAAGCGGGCGATAATAAGGATACACTTGCCAACCTGTCCAGTGATGCAGTCGCCTTGAATCATGCCTCCACCAAGTATTCGGATGACTGCCAAAGAAGTTCTCCTTCCACCAACGCTGCCATAAAAAATTTCAGTTCTGCTATTCATTTGGATCTTTCCCTGAGAAGATGTCAACCTAATGATTTTGAGGACCGCGGTGCAGAAGGGCGGGCTACCCTCAAACATTCTAGTGCTTCAGCTTTTACAAGATACACTTACAGGCCATTGCAAACACCTAAAGCAAAATCAGGCAGTATCTGTGATGGGCAAAAGGAATATGGAAGCAATACCGAGGGAAGAATGTTTGATATTGGTGGGACTATTGGTGCTACTTCTACCTCTGATACCATTAATCCCACGCTAAGTCTGCAAAAGAGTAGTACTTCTGTGCCTCCGATAACTGGTCAATCTAATCAGTCTGAAATTGCAAAATCATGTACTTCAGAGACGGTAATCCCTCTTCAAGATTCAGAGAAAGATTTGATGTCTAATAATCAATGCTCAGGCTATGGCTCCTTACTCTCTCCCAACTTTTGCACACAACGGGGTCCCTCCTCGTCTCCATGCCCAGCTTTAGTCACTCATCCAGAACCCATCTTTGCAAATCATAATTTGGAGCAGTTTCTAAACCAGCATCACAGCGTCAGCAATGCCACAAACTGGAAGATAGAAAATCCGGGGCATAGGTTGGAGTCTGCAGAAAATCAAGGCCATATATCGCCTACCACTGATCATAGTGCAAACAGTAGTCTATGTGGTGGTGGTAATGCGACTCACATTCGAACCGTGGGATATGCTAGCACCTGTGGGAGCAACAGCAACGTTGATCGGGTTGGCATTTCCAGGGTTACATCTGAGAGCAAAAATGAAGAAGCTTTGTTTTCTCAAGGAGTAGATTCTCATCGATCCAGTCAAAGAGAAGCAGCTCTAACAAAGTTCCGACTGAAACGAAAAGATAGATGTTATGAGAAAAAGGTGCGGTACGAGAGCAGGAAAAAACTCGCCGAACAACGTCCTAGAGTGAAGGGACAGTTTGTCCGTAGAGTGTACACTGATCCACTGCCTCCAGAAACCAACAGCAATATGTCCAACGCTTAG 2190 45.75 MKQKGHRLVFPSFPLNSQLSTLNPFPSCRLLLRRRRSPPCDSDMGEAVVSCEDVNVDISPGIDDMVAEAQSADSHKPDKEGAGIKWERFLPKMMLRVLLVEADDSTRQIITALLRKCCYRVAAVPDGLKAWEILKERPRNVDLILAEVELPSISGFALLTLIMEHETCKNIPVIMMSSEDSISTVYKCMMKGAADYLLKPLRRNELRNLWQHVWRRQASSSVRNDVQEKVEVTSENETASNHSTGYVAGVQRNNKNIEKGSDTQSSCTKVDFEVGSRIQEYSHPSQGNASPKDFRLQKDERHINLSQRLAMHENETGGLAMGCYVNADLPITLSMGLEPMNDSRISPSMANEAGDNKDTLANLSSDAVALNHASTKYSDDCQRSSPSTNAAIKNFSSAIHLDLSLRRCQPNDFEDRGAEGRATLKHSSASAFTRYTYRPLQTPKAKSGSICDGQKEYGSNTEGRMFDIGGTIGATSTSDTINPTLSLQKSSTSVPPITGQSNQSEIAKSCTSETVIPLQDSEKDLMSNNQCSGYGSLLSPNFCTQRGPSSSPCPALVTHPEPIFANHNLEQFLNQHHSVSNATNWKIENPGHRLESAENQGHISPTTDHSANSSLCGGGNATHIRTVGYASTCGSNSNVDRVGISRVTSESKNEEALFSQGVDSHRSSQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRRVYTDPLPPETNSNMSNA 729
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 20717752 20722929 - MC06g1349 Mch6g1811 691258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g1811 729 MobiDBLite consensus disorder prediction 695 709 - -
Mch6g1811 729 SMART REC_2 95 210 IPR001789 GO:0000160(InterPro)
Mch6g1811 729 PANTHER TWO-COMPONENT RESPONSE REGULATOR 79 345 IPR045279 GO:0009736(InterPro)
Mch6g1811 729 Pfam CCT motif 670 712 IPR010402 GO:0005515(InterPro)
Mch6g1811 729 ProSiteProfiles CCT domain profile. 670 712 IPR010402 GO:0005515(InterPro)
Mch6g1811 729 SUPERFAMILY CheY-like 89 219 IPR011006 -
Mch6g1811 729 MobiDBLite consensus disorder prediction 695 729 - -
Mch6g1811 729 MobiDBLite consensus disorder prediction 231 266 - -
Mch6g1811 729 MobiDBLite consensus disorder prediction 595 614 - -
Mch6g1811 729 ProSiteProfiles Response regulatory domain profile. 96 214 IPR001789 GO:0000160(InterPro)
Mch6g1811 729 MobiDBLite consensus disorder prediction 487 508 - -
Mch6g1811 729 Gene3D - 93 282 - -
Mch6g1811 729 Pfam Response regulator receiver domain 97 208 IPR001789 GO:0000160(InterPro)
Mch6g1811 729 MobiDBLite consensus disorder prediction 599 614 - -
Mch6g1811 729 CDD psREC_PRR 97 200 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g1725 Mch-Chr3:18746928 Mch6g1811 Mch-Chr6:20717752 2.14E-27 dispersed
Mch6g0251 Mch-Chr6:1642550 Mch6g1811 Mch-Chr6:20717752 2.64E-11 dispersed
Mch6g1811 Mch-Chr6:20717752 Mch8g0075 Mch-Chr8:417170 2.91E-21 dispersed
Mch6g1811 Mch-Chr6:20717752 Mch1g0773 Mch-Chr1:11448255 4.49E-53 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43591 PF00072 Response_reg 8.50E-21 CL0304 Mch TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g1811 K12130 - csv:101209788 1006.9