Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g1825 ATGGCTTCGGATCCGAAGGTTCATCTATTCGAAGAAGTGGCAAAGCACAACAAAACCAAAGATTGTTGGCTTGTAATTTCTGGGAAGGTTTATGATGTAACTCCTTTCATGGAGGATCATCCCGGAGGCGATGAAGTATTATTGTCCGCAACTGGAAAAGATGCGACAAACGATTTCGAAGATGTTGGGCACAGCGATTCAGCAAGAGAAATGATGGACAAATATTACATAGGAGAAATTGATCCTTCGACAGTTCCTTTGAAGAGGATGTACATTCCAGCGCAGCAAACCCAGTACAACTCAGACAAGACACCCGAATTTGTGATTAAGATATTGCAGATTCTGGTTCCCATATTCATTTTGGGATTGGCATTTGCCGTTCGACACTACACCAAGAATGAATGA 405 42.22 MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKRMYIPAQQTQYNSDKTPEFVIKILQILVPIFILGLAFAVRHYTKNE 134
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 20818771 20823133 - MC06g1361 Mch6g1825 691272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g1825 134 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037(InterPro)
Mch6g1825 134 Gene3D - 1 86 IPR036400 -
Mch6g1825 134 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Mch6g1825 134 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Mch6g1825 134 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Mch6g1825 134 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Mch6g1825 134 PANTHER CYTOCHROME B5 6 132 IPR050668 GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Mch6g1825 134 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Mch6g1825 134 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 88 IPR036400 -
Mch6g1825 134 SMART Cyt_b5_2 8 81 IPR001199 -
Mch6g1825 134 Pfam Cytochrome b5-like Heme/Steroid binding domain 11 80 IPR001199 -
Mch6g1825 134 FunFam Cytochrome b5 type B 2 85 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch5g0194 Mch-Chr5:1248593 Mch6g1825 Mch-Chr6:20818771 3.02E-67 dispersed
Mch6g1825 Mch-Chr6:20818771 Mch7g0872 Mch-Chr7:13249802 2.31E-63 dispersed
Mch5g0510 Mch-Chr5:3382257 Mch6g1825 Mch-Chr6:20818771 7.86E-46 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g1825 K23490 - csv:101207109 262.692