Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g1952 ATGGCCTTCCTTCGACTCCTTCATCCTCCCACTGCCGTTCATTCTTCTCTAATTACCCTCCTCCTTCTCCCGCTGCTTCCGCCCGCCATGACTCTGCCGGAGCTTCCCTTCCACCGTGCCGCCGATGGAGGCCCCGTCGTTCCGGTCACCAATCTCGTCAAGTTCCTCGAGCGCCTTCAACTTGCGGCGCTCACCTCCTTCGGGAAACTGGATTTTGACCTCAAATACTACGTTGATTTGTCGCTCAAGCACGATTTGAATTCCACGGAGCGCGCTTTCGATGCCCTTCGGAGATCCCCCAATGGCTCCGTCCCGGTTGAGGAATTGAAGACCTTCATTCGGGAGTACTTCGGAAGTGCCGGAAATGATATGGTGTATTTGGAGCCGGCGGATTTTGTCCCCCTCCCCAAAGGATTTCTGCCCAAGGTGGAGAACGCGGAGGTCAGAGCTTGGGCTTTGGATATCCATCGTCTCTGGAAGAATCTCAGCCGTACAGCCTCCGATGATCTCCTAAATCGCCCCGATGACCACACTCTGCTCCCGTTGCCCAAACCCTGCGTCATTCCGGGATCAAGATTCCGGGAAACTTACTACTGGGATTCCTACTGGATTATCAGAGGTTTGTTAGCAAGTAAAATGCATGATACTGCAAAGGGAATTGTTATCAATCTCATTTCAATGATAGAAAAGTTTGGCCATGTTCTGAATGGTGCCAGAGTTTATTACACCAACAGAAGTCAGCCTCCCCTCTTGAGTTCCATGGTTTATGACATATACCTTAGGACACAGGATTTAGAGTTTGTGAGGACTGCACTCCCAGCTTTGATCAAAGAGCATAAGTTTTGGAATTCAGGATTCCATTCGATTACTGTCCAGAATGCTCCTACTGGAAATCATTCTTTATGTAGGTATTTTGCAATGTGGAACGAACCGAGGCCTGAATCTTCACTGTTGGATGAGAAACTTGCTTCGAAGTTAGTAAATAACCATGAAAAGGAGCATCTATACCGAGAAATTGCATCGGCAGCTGAATCTGGTTGGGATTTCAGTACAAGATGGATGAGGGATCCGACCGACTTATCGACATTGGCTACAACTTCAATCTTGCCAGTTGATCTCAATGTATTCATACTCAAGATGGAACTTGACATTTCCAATTTGGCAAGAGCTGTTGGAGATTCTGGCACTGCAGAGCAGTTCTTGGAGGCTTCTTCAGTCCGAAAGAGGACAATCGACTCTATATTCTGGAATTCAGAGAAGGGACAATGGCTTGATTACTGGCTTGATAATAGCTCTTACGAGGGAGCCCACACATGGGATGCTCGTAACCAGAATCAGGTCATATATGCTTCAAACTTTATTCCGTTGTGGATCGAATCGTTCTACTCCGACAGCATTCGACTGAAGAAAGTCATGAAAAGTTTACAAAATTCGGGCTTGCTGTGCGATTCTGGGATCGCAACATCAATGATCAATTCAGGACAACAATGGGATTTCCCGAACGGTTGGGCGCCGATTCAGCACATGATCGTTGAGGGACTGGTGAGATCAGGATCGAAAGAAGCAAGGGCATTGGCGGAGGATATTGCCGTGAAATGGCTCCGAACCAACTATGTAGTTTACAAGAAGACAGGGTATATGCATGAGAAATATGATGTCGAAAAGTGTGGAGACTTTGGAACAGGAGGTGAATATATCTCTCAGACTGGTTTTGGATGGTCAAATGGAGTTGTTTTGGCATTCCTTGAAGAGTTTGGATGGCCTGCAGATCAAAACATAGAC 1782 47.14 MAFLRLLHPPTAVHSSLITLLLLPLLPPAMTLPELPFHRAADGGPVVPVTNLVKFLERLQLAALTSFGKLDFDLKYYVDLSLKHDLNSTERAFDALRRSPNGSVPVEELKTFIREYFGSAGNDMVYLEPADFVPLPKGFLPKVENAEVRAWALDIHRLWKNLSRTASDDLLNRPDDHTLLPLPKPCVIPGSRFRETYYWDSYWIIRGLLASKMHDTAKGIVINLISMIEKFGHVLNGARVYYTNRSQPPLLSSMVYDIYLRTQDLEFVRTALPALIKEHKFWNSGFHSITVQNAPTGNHSLCRYFAMWNEPRPESSLLDEKLASKLVNNHEKEHLYREIASAAESGWDFSTRWMRDPTDLSTLATTSILPVDLNVFILKMELDISNLARAVGDSGTAEQFLEASSVRKRTIDSIFWNSEKGQWLDYWLDNSSYEGAHTWDARNQNQVIYASNFIPLWIESFYSDSIRLKKVMKSLQNSGLLCDSGIATSMINSGQQWDFPNGWAPIQHMIVEGLVRSGSKEARALAEDIAVKWLRTNYVVYKKTGYMHEKYDVEKCGDFGTGGEYISQTGFGWSNGVVLAFLEEFGWPADQNID 594
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 21988289 21991695 + MC06g1465 Mch6g1952 691399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g1952 594 PRINTS Glycosyl hydrolase family 37 signature 569 582 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Mch6g1952 594 PRINTS Glycosyl hydrolase family 37 signature 336 353 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Mch6g1952 594 PRINTS Glycosyl hydrolase family 37 signature 231 249 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Mch6g1952 594 PRINTS Glycosyl hydrolase family 37 signature 301 318 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Mch6g1952 594 PRINTS Glycosyl hydrolase family 37 signature 489 505 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Mch6g1952 594 PRINTS Glycosyl hydrolase family 37 signature 368 385 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Mch6g1952 594 PRINTS Glycosyl hydrolase family 37 signature 411 427 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Mch6g1952 594 PANTHER TREHALASE 53 592 IPR001661 GO:0004555(InterPro)|GO:0004555(PANTHER)|GO:0005991(InterPro)|GO:0005993(PANTHER)
Mch6g1952 594 Pfam Trehalase 70 586 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Mch6g1952 594 ProSitePatterns Trehalase signature 2. 496 505 IPR018232 GO:0004555(InterPro)|GO:0005991(InterPro)
Mch6g1952 594 Gene3D - 53 593 IPR012341 GO:0005975(InterPro)
Mch6g1952 594 SUPERFAMILY Six-hairpin glycosidases 65 588 IPR008928 GO:0005975(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g1952 Mch-Chr6:21988289 Mch6g1953 Mch-Chr6:22001469 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g1952 K01194 - csv:101208719 960.674