Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g1953 CTCCCATTGCTCCTTCTCCCCGCCATGACCCTGCCGGAAGTTCTCTTGCCGCGCGCCGCCGACCGAGGCCCCGTCGTTCCCGTCACCGACCTCGTCAGGTTCCTCGAGCGCCTTCAGCTCGTTGCCTTCAACTCCTCCGGGAAGCTGGATTTCGATCTGAAATACTATGTCGATTTGTCGCTCAAGTACGATCTCAATTCTACCGAGCTCGCATTCGATGCCCTCGAGAGAGCCCCCAATGGCTCCGTCCCGGTTGAGCAACTGAAGACGTTCATTAGGGAGTATTTCGGAGGCGCCGGAAACGATTTGGTGTATTCGGAGCCGGCGGATTTTGTCCCCCAGCCTACGGGCTTTTTGCCCAAGGTCGAGAACGCGGAGGTCAGAGCTTGGGCTTTCGATATCCATAATTTCTGGAAGAATCTCAGCCGTAGAACCTCCGATGATCTCCTCAAGCGGCCGGATTCCCACACTCTGCTGCCGCTGCCGAAACCCTGCGTCGTTCCGGGATCAAGATTCCGGGAAATTTACTATTGGGATTCGTACTGGATTATCAGAGGTTTATTAGCAAGTAAAATGTATGATACTGCAAAGGGAATTGTTATCAATCTCATTTCAATGATAGAAGATTTTGGCCATGTTTTGAATGGTGCCAGAGCTTATTACACTAACAGAAGTCAGCCTCCCCTCTTGAGTTCCATGGTTTATGACATATACCTTAGGACAGAGGATTTAGAGTTTGTGAGGACTGCACTCCCAGCTTTGATCGAAGAGCACAAGTTTTGGAATTCAGGATTCCATTCGGTTGCTGTCCGGAATGCTCCTGGTGGAAATCATTCTTTGTGTAGGTATTATGCCATGTGGAACGAACCAAGGCCGGAATCTTCACTGTTGGACGAGAAACTTGCTTCGAAGTTAGTAAATAACCATGAAAAGCAGCATCTGTACCGAGAACTCGCAACAGCAGCTGAATCTGGTTGGGATTTCAGTTCAAGATGGATGAGGGATTCGACTGACTTATCGACATTGGCTACATCTTCAATCCTGCCTGTTGATCTCAATGCATTTGTACTCAAGATGGAACTTGACATTTCCAATTTGGCAAGAGCTATTGGAGATTACTGCACTGCAGATCACTTCTTGGAAGCTTCTATAGTCAGAAAGAGGACAATCAACGCTATTTTTTGGAATTCAGAGAAGGGACAATGGCTGGATTACTGGCTTGAAAATGGCTCTTACAAGGGAGCCCACACATGGGATGCTCGGAACCAGAATCAGGAAATATATGCTTCAAACTTCATTCCGTTGTGGATCGAATCGTTCTACTCCGATAACAGACAGCTGAAGAAAGTCTTGAAAAGTTTACGGAACTCTGGCTTGCTTTGCAATGCTGGGATTGCAACATCATTGATCAATTCAGGAGAACAATGGGACTTTCCGAACGGCTGGGCGCCAATTCAGCACATGATTGTCGAGGGACTAGCAAGATCCGGATTGAAAGAAGCAAGGGCATTGGCGGAAGATATCGCCATGAAATGGCTCCGAACCAACTATGTAGCTTACAAGAATACAGGGTATATGCATGAGAAATACGATGTCGAAAAGTGTGGAGACTTTGGTGGAGGAGGTGAATATATCCCTCAGACTGGTTTTGGATGGTCAAATGGAGTTGTTTTGGCATTCCTCGAAGAGTTTGGATGGCCTGCAGATCAAAACATAGACTGCTACTTACCTTCTTAA 1737 47.32 LPLLLLPAMTLPEVLLPRAADRGPVVPVTDLVRFLERLQLVAFNSSGKLDFDLKYYVDLSLKYDLNSTELAFDALERAPNGSVPVEQLKTFIREYFGGAGNDLVYSEPADFVPQPTGFLPKVENAEVRAWAFDIHNFWKNLSRRTSDDLLKRPDSHTLLPLPKPCVVPGSRFREIYYWDSYWIIRGLLASKMYDTAKGIVINLISMIEDFGHVLNGARAYYTNRSQPPLLSSMVYDIYLRTEDLEFVRTALPALIEEHKFWNSGFHSVAVRNAPGGNHSLCRYYAMWNEPRPESSLLDEKLASKLVNNHEKQHLYRELATAAESGWDFSSRWMRDSTDLSTLATSSILPVDLNAFVLKMELDISNLARAIGDYCTADHFLEASIVRKRTINAIFWNSEKGQWLDYWLENGSYKGAHTWDARNQNQEIYASNFIPLWIESFYSDNRQLKKVLKSLRNSGLLCNAGIATSLINSGEQWDFPNGWAPIQHMIVEGLARSGLKEARALAEDIAMKWLRTNYVAYKNTGYMHEKYDVEKCGDFGGGGEYIPQTGFGWSNGVVLAFLEEFGWPADQNIDCYLPS 578
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 22001469 22005224 + MC06g1466 Mch6g1953 691400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g1953 578 PANTHER TREHALASE 48 574 IPR001661 GO:0004555(InterPro)|GO:0004555(PANTHER)|GO:0005991(InterPro)|GO:0005993(PANTHER)
Mch6g1953 578 ProSitePatterns Trehalase signature 2. 475 484 IPR018232 GO:0004555(InterPro)|GO:0005991(InterPro)
Mch6g1953 578 Gene3D - 37 574 IPR012341 GO:0005975(InterPro)
Mch6g1953 578 SUPERFAMILY Six-hairpin glycosidases 44 567 IPR008928 GO:0005975(InterPro)
Mch6g1953 578 PRINTS Glycosyl hydrolase family 37 signature 280 297 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Mch6g1953 578 PRINTS Glycosyl hydrolase family 37 signature 315 332 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Mch6g1953 578 PRINTS Glycosyl hydrolase family 37 signature 347 364 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Mch6g1953 578 PRINTS Glycosyl hydrolase family 37 signature 548 561 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Mch6g1953 578 PRINTS Glycosyl hydrolase family 37 signature 468 484 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Mch6g1953 578 PRINTS Glycosyl hydrolase family 37 signature 210 228 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Mch6g1953 578 PRINTS Glycosyl hydrolase family 37 signature 390 406 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Mch6g1953 578 Pfam Trehalase 49 565 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g1952 Mch-Chr6:21988289 Mch6g1953 Mch-Chr6:22001469 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g1953 K01194 - csv:101208719 1017.68