Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g1983 ATGGCTCTCCAGAAGATCGAAGTAACCAAATTTTATATGATTATTGTATGGTTTCTGGCGTACGCAAGAACGTACTCCTTTGCGGAATCGTCGACGTGCTTGATGGTGTACAAGGAAGGTGGCGCTACGGCAGTATTTCAATCCCCGAAATGTCCTCTCTGGAAGCTCTCCGACTACACTTTTCAATCACCCAGCGCCTCTCATTGTCAAATTGCAATGCATCAGGGTCGAAGAAAGTATCAGGAGGATCGCACTCTCTGTGCTCTCGATGTTCGAATTCCCTTCCCAGGTAAATCAGGTCTCACGGAGATCCCTGTCGGAGTAATAGCGGTTTTCGATGGTCACAATGGTGCTGAAGCTAGTGAGATGGCTTCAAAGATTTTGTTAGAGTATTTTGTCGTGCATACTTATTTTCTTCTTGATGCCACTTATTCTGGAATTTTCAAGAGATCCGTTAAGACGTTTTCGAATGAGAGGGATCATGGTACCATCTTTAATCAGCTTAGTTGGAATGAGGAAATTAGCAAGCGTGGTCTGGAACTTGGAAGGCTTAAATACTTACTTCCAGCAGATCTTGATAATGATTTCCATTTGGAAATTTTGAAAGAAGCACTGTTGAGAGCTATACAAGATATTGATAAAACATTTTCCAAGGAAGCACATAAATATAATCTCGTTTCGGGTTCTACTGCTACTGTTATATTATTAGCAGATGCGCAAATTTTGGTTGCAAATATTGGTGATTCAAAGGCTTTCTTGTGCTCTGAAAAATTTCAGTCACCCACAGAGGCTAAAGCCACATTCTTAAGGTTATACAAGCAAAAAAGATATAGTGGTGCCCCACGTGCAAGGGGCCATGGCAATTCTAGACCGGATTCCTATGATGGGCTGGCACATTTTTATGTCAAAGAATTGACAAGAGATCATCATCCAGATAGAGAGGACGAAAGATCTAGGGTGGAGATTGCTGGGGGTCACGTTGTTGATTGGGGTGGTGTACCTCGAGTAAATGGTCAGTTGGCTATAACCAGAGCAATTGGTGACGTGCCTTTTAAAAGCTATGGGGTTATATCTGCACCAGAAGTGACTGACTGGCAACCTTTGACTACTAACGATAGCTATTTGGTGGCTTCATCTGATGGCATTTTTGAGAAACTGAGCTCACAAGACGTATGTGACTTGATGTGGGAAATACACAATGATGGTATGTCAAGTTCTGAACATTATCCTTCATGCTCATACTCATTGGCGGATTGCATTGTTAGCACTGCCTTTGAAAGGGGCAGTATGGATAACATGGCTGCTATTGTGGTTCCTTTAAGACCTGCTAGTTCTTCTCAGAGATATTTGGAGGCAAGCTTTGTTGCAAAGAGAGACTTGAGTTTTCCCATATCTGGATTAGAAAAGCTTACTAGAGAGCACTCAGCCAATGGCGTGTCTTCAAATGCTGTCCAATTGGAGCATTCTCATCCAGTTATGTCCAAGTTCAAGAGATTATTAGTTGAAGGAAGACACAGTAATGTGGGATGTTTTTATCTGTCTGAGAATCTGGATGAATACAAGGATTACGGGTTGAAAACTCAAAATGAAGAAGAATATTTGTGTGATCTACCCCACGCTCTACCAGAATCCATCAACCAGCCCTATGGTGGATCTTTAAATGTGTACAATGATCAAAACTTGTGCTTTCATCTTGGAACGACTGAAGCTAAAGATCAGTGCTTTAATCCTGAAGGCTTTGCTAGTTTTCTTGGTTTTCTTGAATCAATTCCTTTTCATGATCCTGGTCCAGATTATCAACTATTTGAGCATCCACCGCCTGTCTTGAGGTGCATAAATTTTCTCTACTGTTTATCTGGATACTGTGTACTGCATTTATGCTTGTTAGGCTTACATTGGAAATTGTTGCTGGGATCACATTTTCCTGAGGGAACATATATATATATATATATTATAACTGGAAAGTATGTCTTAAAGAAAAGGTTCGGTCGGGGTTCCTATGGCGAAGTATGGCTGGCTTTTCATGGGAACTGCCAGGAAGGCTTTAGTGGAGTTGGAGAGAATATTAATGTTTCATGCAACTCACCTTTTGGTGACACCAACGTTGGAAACTGTAGCTGCTCTTCAAATAGTTCTCAAGCTTACTTTCTGGAGGATAACTTGTTCATCATGAAACGTGTAATGGTAGAAAGAGGTGCTGGAGTCTATTTGAGTGGCTTACGGGAGAAATATTTTGGTGAATTATTTTTTAATGCAACTATACGCCTTGGAGATGTGTTATCAACTGGAATATCGAACTTTGTCTTTGAAGAGCCACTGTGGGGGTCAAAAGACTTATTGGCAAAAGATGAATCACTGAGTTATGAAGTAGGGAAAATCAGGCATTCTAAAAATATTTTTCTGAATCAGTTTAGACCAAAGACAGTTATCTATGAAGAAGGTTTAAATCATATTGCGAGATATGTAGAATCCTTTGAATCTAGGTCTAATGAAATATGGCTTGTATTTCATTATGAAGGCATGTCCCTCTCAAAGCTTGTATATTCTATCCAAGATTCTGATGAAGAAACGGTTGAGCCAAAAAAACACGTTCAAATTTTACAACCTTCTAAGTGGTGGCACTGGTTGAAAACAACAGAAGCAGGACAAGAGGAAATGAAACATTTGATACGCCAGTTGTTGATGGCACTCAAGTCTTGTCATGACCGCAATATCACTCACAGGGATATTAAACCTGAGAACATGGTGATATGCTTCGAAGATCAGGCTACTGGAAGATGCTTGAATGGAAGCCGATGGGGAGATGAGAACTTCTCTACTAAAATGCGCATTATTGACTTTGGTAGTGCTATTGATGCATTCACAGTTAAACATCTATATGGATCTACTGGGCCTTCCAGAGCTGAACAGACTTTGGATTACGCACCCCCTGAAGCCTTACTTAATTCAAGTTGGTATCAGGAGATGTCAAGCTCGACTTTGAAGTATGATATGTGGAGTGTTGGTGTTGTGATGTTGGAATTGATCTTAGGATCACCCAATGTTTTTCAGGTAAGTGATTTAACCCGCGTTCTTTTGGACCAGCATCTTCAAGGTTGGAATGAAGGCTTAAAGGAGCTAGCATACAAGCTTAGAACGTTCATGGAGTTGTGCATTTTAATTCCTGGAAGTTCCTCAAAAAGTAAAAAAAGTGATCATGTTAGTTCACCAGCATCCTGGAAATGCTCTGAAGAAGTTTTTGGCCACCAAATAAGGAGTAGAGATCCTCTTAAACTTGGGTTTCCAAATGTTTGGGCTTTACGGTTAGTCCGCAATCTACTACAATGGAATCCAGAGGATCGTTTGAGTGTCGATGATGCTTTGCGACATCCTTATTTCCACCCTTCTTCTAAAGGATGA 3399 40.63 MALQKIEVTKFYMIIVWFLAYARTYSFAESSTCLMVYKEGGATAVFQSPKCPLWKLSDYTFQSPSASHCQIAMHQGRRKYQEDRTLCALDVRIPFPGKSGLTEIPVGVIAVFDGHNGAEASEMASKILLEYFVVHTYFLLDATYSGIFKRSVKTFSNERDHGTIFNQLSWNEEISKRGLELGRLKYLLPADLDNDFHLEILKEALLRAIQDIDKTFSKEAHKYNLVSGSTATVILLADAQILVANIGDSKAFLCSEKFQSPTEAKATFLRLYKQKRYSGAPRARGHGNSRPDSYDGLAHFYVKELTRDHHPDREDERSRVEIAGGHVVDWGGVPRVNGQLAITRAIGDVPFKSYGVISAPEVTDWQPLTTNDSYLVASSDGIFEKLSSQDVCDLMWEIHNDGMSSSEHYPSCSYSLADCIVSTAFERGSMDNMAAIVVPLRPASSSQRYLEASFVAKRDLSFPISGLEKLTREHSANGVSSNAVQLEHSHPVMSKFKRLLVEGRHSNVGCFYLSENLDEYKDYGLKTQNEEEYLCDLPHALPESINQPYGGSLNVYNDQNLCFHLGTTEAKDQCFNPEGFASFLGFLESIPFHDPGPDYQLFEHPPPVLRCINFLYCLSGYCVLHLCLLGLHWKLLLGSHFPEGTYIYIYIITGKYVLKKRFGRGSYGEVWLAFHGNCQEGFSGVGENINVSCNSPFGDTNVGNCSCSSNSSQAYFLEDNLFIMKRVMVERGAGVYLSGLREKYFGELFFNATIRLGDVLSTGISNFVFEEPLWGSKDLLAKDESLSYEVGKIRHSKNIFLNQFRPKTVIYEEGLNHIARYVESFESRSNEIWLVFHYEGMSLSKLVYSIQDSDEETVEPKKHVQILQPSKWWHWLKTTEAGQEEMKHLIRQLLMALKSCHDRNITHRDIKPENMVICFEDQATGRCLNGSRWGDENFSTKMRIIDFGSAIDAFTVKHLYGSTGPSRAEQTLDYAPPEALLNSSWYQEMSSSTLKYDMWSVGVVMLELILGSPNVFQVSDLTRVLLDQHLQGWNEGLKELAYKLRTFMELCILIPGSSSKSKKSDHVSSPASWKCSEEVFGHQIRSRDPLKLGFPNVWALRLVRNLLQWNPEDRLSVDDALRHPYFHPSSKG 1132
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 22242782 22262117 - MC06g1495 Mch6g1983 691430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g1983 1132 Pfam Protein phosphatase 2C 303 433 IPR001932 -
Mch6g1983 1132 Pfam Protein phosphatase 2C 200 256 IPR001932 -
Mch6g1983 1132 Pfam Protein kinase domain 872 1126 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g1983 1132 SMART serkin_6 656 1126 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g1983 1132 ProSiteProfiles Protein kinase domain profile. 656 1126 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g1983 1132 SUPERFAMILY Protein kinase-like (PK-like) 814 1128 IPR011009 -
Mch6g1983 1132 PANTHER PROTEIN PHOSPHATASE 68 439 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Mch6g1983 1132 ProSiteProfiles PPM-type phosphatase domain profile. 65 440 IPR001932 -
Mch6g1983 1132 SMART PP2C_4 62 438 IPR001932 -
Mch6g1983 1132 Gene3D - 61 447 IPR036457 -
Mch6g1983 1132 ProSitePatterns Serine/Threonine protein kinases active-site signature. 905 917 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch6g1983 1132 CDD PP2Cc 75 440 IPR001932 -
Mch6g1983 1132 SUPERFAMILY PP2C-like 65 441 IPR036457 -
Mch6g1983 1132 Gene3D Transferase(Phosphotransferase) domain 1 869 1127 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g1983 Mch-Chr6:22242782 Mch8g0557 Mch-Chr8:3997575 9.71E-21 dispersed
Mch6g1983 Mch-Chr6:22242782 Mch8g0123 Mch-Chr8:720477 6.78E-11 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77512 PF00069 Pkinase 1.30E-26 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g1983 - - - 0.0