Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g1995 ATGGCTGGAGATGCGTTTCTGATCCCGGTGGAATCTCAGGCTTCGGTGAAGAAGAAGACGAAGAAGAAGACTGTAATTTCCAGGAGCTGGGTTTCGCTGGACCATGAAGGGAGGAGTACTGTTTTGGACGTCGATAAGTATGCGATTATGCAAAGGGTTCAGATTCATGCCAGAGATCTTCGGCTTCTTGATCCTCTCTTATCGTATCCTTCCACTATCTTGGGCAGAGAAAGAGTGATTGTTCTCAATTTGGAGCACATCAAGTCAATTATCACGGCAGACGAGGTGCTGCTTAGAGATCCAATGGATGAAAATGTAGTTCCAATCGTTGAAGAACTGCAGAGACGGTTGCCTTCTACAAGTTCCATTTACCAAGGACAAGGTGAAGAAGAAGAGCCCCCTACCACCCAGAATGAGTTGGCTGAAAATGAGTTTCCATTTGAGTTCCGTGCCTTGGAGGTTGCACTAGAAGCAATTTGTAGTTTTCTTGATGCACGTACAAGAGAACTAGAGACTGATACATATCCTGCTTTAGATGAACTGACCTCCAAGATTAGCAGTCGTAACTTGGACCGAGTGCGCAAACTGAAGAGTGCAATGACAAGGTTGACCAATCGGGTGCAAAAGGTTAGGGATGAACTTGAACAACTTCTGGATGATGACGACGATATGGCGGAACTTTACTTGTCACGAAAAGTAGCCGGAATGTACACCCCTGAAAGTGGCTCCGGGACTCCAAATTGGTTACTTGCTTCTCCTAAAGACTATTATTCAAAGATGTCAAAAACCAGTAGAGCAAGTTTAGCTACAATCCGAGGAGAAAACGATGTTGAGGAACTTGAAATGCTACTCGAGGCATCATCCTTCATACTGAATGTCCTGCAGGCTTATTTTATGCAGATAGAAAGTACATTAAACAAATTAATCACGCTTCGAGAGTACATCGATGACACAGAGGATTACATCAACATTCAGCTTGACAACCACAGGAATCAACTTATTCAGCTAGAACTCTTTTTGAGCTCTGGGACTGTTTGTTTGTCTATTTATTCTTTAGTGACTGCAATATTTGGAATGAATATCCCGTATACCTGGAAGGAAGATCATGAACACGTATTCAAATGGGTGGTCATCGTCACAGGAATAGTTTGTGCATCCATTTACTTGACGCTAAGTTCGTATGCACGGTACAAAGGTCTCGTTGAATCTTGA 1212 43.15 MAGDAFLIPVESQASVKKKTKKKTVISRSWVSLDHEGRSTVLDVDKYAIMQRVQIHARDLRLLDPLLSYPSTILGRERVIVLNLEHIKSIITADEVLLRDPMDENVVPIVEELQRRLPSTSSIYQGQGEEEEPPTTQNELAENEFPFEFRALEVALEAICSFLDARTRELETDTYPALDELTSKISSRNLDRVRKLKSAMTRLTNRVQKVRDELEQLLDDDDDMAELYLSRKVAGMYTPESGSGTPNWLLASPKDYYSKMSKTSRASLATIRGENDVEELEMLLEASSFILNVLQAYFMQIESTLNKLITLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSIYSLVTAIFGMNIPYTWKEDHEHVFKWVVIVTGIVCASIYLTLSSYARYKGLVES 403
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 22361998 22367467 + MC06g1505 Mch6g1995 691442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g1995 403 Pfam Magnesium transporter MRS2-like 35 330 - -
Mch6g1995 403 Gene3D - 13 101 - -
Mch6g1995 403 Gene3D Magnesium transport protein CorA, transmembrane region 104 333 - -
Mch6g1995 403 FunFam Magnesium transporter MRS2-1 18 101 - -
Mch6g1995 403 Coils Coil 193 220 - -
Mch6g1995 403 CDD Mrs2_Mfm1p-like 30 400 IPR039204 -
Mch6g1995 403 Gene3D Magnesium transport protein CorA, transmembrane region 340 394 - -
Mch6g1995 403 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 17 400 IPR039204 GO:0015095(PANTHER)|GO:0015693(PANTHER)
Mch6g1995 403 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 339 390 IPR045863 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0557 Mch-Chr10:3662533 Mch6g1995 Mch-Chr6:22361998 7.45E-90 dispersed
Mch6g1995 Mch-Chr6:22361998 Mch8g1060 Mch-Chr8:7453566 1.15E-101 dispersed
Mch6g1995 Mch-Chr6:22361998 Mch7g1013 Mch-Chr7:14312521 1.04E-190 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g1995 K16075 - csv:101220452 664.455