Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch6g2000 | ATGGAAGAGGTGGAGGAAGCTAACAGAGTAGCTTTAGAGAGCTGCCATGGAGTTCTGAATCTCTTGGCTCAACCTGCAGACCAAATTCAGTTGAGGAATTTAATGGTGGAAACTGGGGAAGCTGTTTTCAAGTTCAGGAAAGTGGTTTCTCTTTTGAATTCTGGTTTGGGTCATGCTAGAGTCAGAAAACTCAACAAGATTTCTCTCCCTTTGCCCCAAAACACCCTCTTGGATTACCCAATTCACCATCTTCCAACCCAAAATCAAAATCTCCACCCTTCTCAGTCTGGTTTGAATGGTAAAGTTTCAACTTTTCTGGGAATCCCAGATTTAGAATTGGGTCCAAATGACAAGAACTTCCTCCAAATTCCCAGACAAGCTCCATCTTTCTTCCCTCAACACCAACAACAACAGAGGATTTTGCCTCAGCAGAAACAGATTAAACAGCAATCAGAAATGATGTTTCTTAGGAACAACAACAGCGGCATGAATCTGAATTTTGACACATCTAACTGCACATTGACAATGTCATCAGCTAGATCTTTCATTTCTTCGTTGAGTATGGACGGGAGCGTGGCGGACGGAAGCTCATTCCACTTGATCGGACCGTCGACGTCGGCCGATAACAAGAGGAAGTTTTCAGGAAGGGGAGGAGATGAGGGGAGCTTGAAATGTGGAAGCACTGGCAAATGCCACTGCTCAAAAAAGAGGAAACATAGGGTGAAAAGATCAATCAAAGTGCCTGCTATAAGTAACAAGCTTGCAGATATCCCTTCTGATGATTATTCATGGAGGAAATATGGGCAGAAGCCAATTAAGGGCTCTCCTCATCCCCGGGGTTACTACAAATGCAGCAGCATGAGAGGGTGTCCAGCGAGAAAGCACGTCGAACGGTGCTTAGAAGACCCGTCGATGCTTATCGTAACATACGAAGGAGAACACAATCACCCGAAAATGTCGACTCAATCTGCACACCCTTAG | 981 | 44.85 | MEEVEEANRVALESCHGVLNLLAQPADQIQLRNLMVETGEAVFKFRKVVSLLNSGLGHARVRKLNKISLPLPQNTLLDYPIHHLPTQNQNLHPSQSGLNGKVSTFLGIPDLELGPNDKNFLQIPRQAPSFFPQHQQQQRILPQQKQIKQQSEMMFLRNNNSGMNLNFDTSNCTLTMSSARSFISSLSMDGSVADGSSFHLIGPSTSADNKRKFSGRGGDEGSLKCGSTGKCHCSKKRKHRVKRSIKVPAISNKLADIPSDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEDPSMLIVTYEGEHNHPKMSTQSAHP | 326 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 22392784 | 22395841 | + | MC06g1510 | Mch6g2000 | 691447 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch6g2000 | 326 | FunFam | WRKY transcription factor 65 | 242 | 319 | - | - | |
Mch6g2000 | 326 | ProSiteProfiles | WRKY domain profile. | 253 | 319 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Mch6g2000 | 326 | Pfam | WRKY DNA -binding domain | 260 | 317 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Mch6g2000 | 326 | SUPERFAMILY | WRKY DNA-binding domain | 256 | 318 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Mch6g2000 | 326 | Pfam | Plant zinc cluster domain | 219 | 256 | IPR018872 | - | |
Mch6g2000 | 326 | Gene3D | WRKY domain | 242 | 318 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Mch6g2000 | 326 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 1 | 322 | IPR044810 | GO:0003700(InterPro) | |
Mch6g2000 | 326 | SMART | WRKY_cls | 258 | 318 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch11g0325 | Mch-Chr11:2005560 | Mch6g2000 | Mch-Chr6:22392784 | 9.74E-59 | dispersed | |
Mch6g2000 | Mch-Chr6:22392784 | Mch8g2135 | Mch-Chr8:24456203 | 3.20E-25 | dispersed | |
Mch6g2000 | Mch-Chr6:22392784 | Mch9g0924 | Mch-Chr9:7413522 | 8.36E-123 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
43601 | PF03106 | WRKY | 1.10E-26 | CL0274 | Mch | TF |
Pathway information
