Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch6g2025 | ATGACAGGTTCTGGTTCTCCATGTGGAGCCTGCAAATTCTTGAGAAGAAAATGTGTCAGAGGGTGTGTTTTTGCACCTTATTTCTGCCATGAACAAGGTGCCACCCATTTTGCTGCCATTCACAAGGTTTTTGGGGCCAGCAATGTCTCTAAGCTTCTGGCCCGTCTTCCACTCACCGAGCGCTGTGAGGCTGCTGTCACAATTTCTTATGAGGCTCAAGCTAGGCTTCAAGATCCTATCTATGGCTGTGTTTCCCATATCTTCGCCCTCCAACAACAGGTAGTGAATCTTCAAGCGCAACTCGCTTCTCTCAAAGAGCAAGCGGCGGAAAGCATTATGAACGGTGGCTCCGATAACGGGGGAGGCGGTGTCAATGAGAAGAGTTACTGCAGAAAGGTTCCTTGCCATCCACAAGATCTCCATAGCTGGTTTCAGTCGGGGCATTTGAATAATGTAACACCCGAGTTCAATCCGAATCCGACCCACAACCCATATTGCGATGAGAACTATCGCATTATGGTTAATTCACAATCCAATGGGAATTATGAGCATAATCACTTGGCCAAGATGGAGGAAAGTGGGTCTTATGGAAGCTTTGAAGAAACCTCAGCTAATTATTCTATGTATTCTCTTGATCACATTCAATCAAATGCCCAACAATGGAGTTTCAATGAGTCTGCAGATGACTTGCAATCGGTTGCTTTTGGCAATACTCGACATTGG | 723 | 45.92 | MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPLTERCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLASLKEQAAESIMNGGSDNGGGGVNEKSYCRKVPCHPQDLHSWFQSGHLNNVTPEFNPNPTHNPYCDENYRIMVNSQSNGNYEHNHLAKMEESGSYGSFEETSANYSMYSLDHIQSNAQQWSFNESADDLQSVAFGNTRHW | 241 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 22589244 | 22590421 | - | MC06g1533 | Mch6g2025 | 691472 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch6g2025 | 241 | ProSiteProfiles | LOB domain profile. | 6 | 108 | IPR004883 | - | |
Mch6g2025 | 241 | PANTHER | LOB DOMAIN CONTAINING PROTEIN | 1 | 234 | - | GO:0005634(PANTHER)|GO:0009755(PANTHER)|GO:0045893(PANTHER) | |
Mch6g2025 | 241 | Pfam | Lateral organ boundaries (LOB) domain | 7 | 105 | IPR004883 | - | |
Mch6g2025 | 241 | Coils | Coil | 87 | 114 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch6g2025 | Mch-Chr6:22589244 | Mch9g0985 | Mch-Chr9:8297890 | 2.76E-62 | dispersed | |
Mch6g2024 | Mch-Chr6:22582221 | Mch6g2025 | Mch-Chr6:22589244 | 5.83E-51 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
43606 | PF03195 | LOB | 9.50E-36 | No_clan | Mch | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch6g2025 | K13945 | - | csv:101214764 | 396.356 |