Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g2025 ATGACAGGTTCTGGTTCTCCATGTGGAGCCTGCAAATTCTTGAGAAGAAAATGTGTCAGAGGGTGTGTTTTTGCACCTTATTTCTGCCATGAACAAGGTGCCACCCATTTTGCTGCCATTCACAAGGTTTTTGGGGCCAGCAATGTCTCTAAGCTTCTGGCCCGTCTTCCACTCACCGAGCGCTGTGAGGCTGCTGTCACAATTTCTTATGAGGCTCAAGCTAGGCTTCAAGATCCTATCTATGGCTGTGTTTCCCATATCTTCGCCCTCCAACAACAGGTAGTGAATCTTCAAGCGCAACTCGCTTCTCTCAAAGAGCAAGCGGCGGAAAGCATTATGAACGGTGGCTCCGATAACGGGGGAGGCGGTGTCAATGAGAAGAGTTACTGCAGAAAGGTTCCTTGCCATCCACAAGATCTCCATAGCTGGTTTCAGTCGGGGCATTTGAATAATGTAACACCCGAGTTCAATCCGAATCCGACCCACAACCCATATTGCGATGAGAACTATCGCATTATGGTTAATTCACAATCCAATGGGAATTATGAGCATAATCACTTGGCCAAGATGGAGGAAAGTGGGTCTTATGGAAGCTTTGAAGAAACCTCAGCTAATTATTCTATGTATTCTCTTGATCACATTCAATCAAATGCCCAACAATGGAGTTTCAATGAGTCTGCAGATGACTTGCAATCGGTTGCTTTTGGCAATACTCGACATTGG 723 45.92 MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPLTERCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLASLKEQAAESIMNGGSDNGGGGVNEKSYCRKVPCHPQDLHSWFQSGHLNNVTPEFNPNPTHNPYCDENYRIMVNSQSNGNYEHNHLAKMEESGSYGSFEETSANYSMYSLDHIQSNAQQWSFNESADDLQSVAFGNTRHW 241
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 22589244 22590421 - MC06g1533 Mch6g2025 691472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g2025 241 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Mch6g2025 241 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 234 - GO:0005634(PANTHER)|GO:0009755(PANTHER)|GO:0045893(PANTHER)
Mch6g2025 241 Pfam Lateral organ boundaries (LOB) domain 7 105 IPR004883 -
Mch6g2025 241 Coils Coil 87 114 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g2025 Mch-Chr6:22589244 Mch9g0985 Mch-Chr9:8297890 2.76E-62 dispersed
Mch6g2024 Mch-Chr6:22582221 Mch6g2025 Mch-Chr6:22589244 5.83E-51 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43606 PF03195 LOB 9.50E-36 No_clan Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g2025 K13945 - csv:101214764 396.356