Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch6g2033 | ATGGAGACCTCCTACTTTTCGTTTTCTGATTCTGATTTCTCGACGGAATCTTCGTTCGGTTCATCGGAAATGGAATCGTCCTTCTCATGGAGCGAGATTTTCTCGATCCACGGCTCCCTCGCATTTCCCGATGATTTTCTCGGCAGCCAAACATCAGGAACCGAATCCAAAATTGTGGTTAAGGAAGAAATCGAAGTGAGTTCGACTGATTTCGAGGAAGAGAAACAGAGGAAGACGCCGGAGAAGAGTTACAGAGGGGTGAGGCGGCGGCCGTGGGGGAAGTACGCGGCGGAGATTAGGGATTCGACGAGGCACGGAGTTAGGGTTTGGCTGGGGACTTTCGACAGCGCCGAAGCGGCGGCTTTAGCGTACGATCAAGCGGCATTTTCGATGAGAGGTTCAATGGCGGTGCTGAATTTTCCGGTAGAAATGGTGAGGGAATCGCTGCAGGACATTAAGTATCAACTGGAGGAGGGGTGCTCGCCGGTGGTGGCTTTGAAGAGAAAACACTCGCTGAGAAGGAAATCCGCGGCGGCGGCGGTGGAGAAGAAGAAGAAGATAAAGAAAACTAACAATGTGATGATTTTGGAAGATTTGGGAACGGAGTATTTGGAGGAACTTTTG | 624 | 50.64 | METSYFSFSDSDFSTESSFGSSEMESSFSWSEIFSIHGSLAFPDDFLGSQTSGTESKIVVKEEIEVSSTDFEEEKQRKTPEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEAAALAYDQAAFSMRGSMAVLNFPVEMVRESLQDIKYQLEEGCSPVVALKRKHSLRRKSAAAAVEKKKKIKKTNNVMILEDLGTEYLEELL | 208 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 22642161 | 22642784 | + | MC06g1540 | Mch6g2033 | 691480 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch6g2033 | 208 | PANTHER | DNA-BINDING DOMAIN | 32 | 182 | IPR044808 | GO:0003700(InterPro)|GO:0009873(InterPro) | |
Mch6g2033 | 208 | FunFam | Ethylene-responsive transcription factor 2 | 82 | 143 | - | - | |
Mch6g2033 | 208 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Mch6g2033 | 208 | Pfam | AP2 domain | 83 | 134 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch6g2033 | 208 | Gene3D | AP2/ERF domain | 82 | 143 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch6g2033 | 208 | ProSiteProfiles | AP2/ERF domain profile. | 83 | 141 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch6g2033 | 208 | SMART | rav1_2 | 83 | 147 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch6g2033 | 208 | PRINTS | Ethylene responsive element binding protein signature | 84 | 95 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch6g2033 | 208 | PRINTS | Ethylene responsive element binding protein signature | 107 | 123 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch6g2033 | 208 | CDD | AP2 | 82 | 142 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch6g2033 | 208 | SUPERFAMILY | DNA-binding domain | 83 | 143 | IPR016177 | GO:0003677(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch6g2033 | Mch-Chr6:22642161 | Mch9g0942 | Mch-Chr9:7684745 | 4.83E-59 | dispersed | |
Mch5g0089 | Mch-Chr5:574484 | Mch6g2033 | Mch-Chr6:22642161 | 4.02E-26 | wgd | |
Mch6g2033 | Mch-Chr6:22642161 | Mch7g0967 | Mch-Chr7:14046891 | 2.78E-56 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
43607 | PF00847 | AP2 | 7.20E-15 | CL0081 | Mch | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch6g2033 | K14516 | - | csv:101220325 | 270.011 |