Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g2051 ATGGGTTGTGTTTTGAACTGCGTTTTCATGATTGTTATCTTCATGTCGATGCCTTTTCCATCTCATAACTCCCACATTTTGATTGCTAATTCACTGTTGAATGCAGCAGAGAGCTTCAATGTTAAAGAGCTTGAGAGAGTTTCAGGGGAAGATGAGAGTGGAGGAAATGAACCTTTTATTCTGGAGAGAGTCAGAGCTCTACTTGGACTCAAGAGCTTACGATTGGGAAATCAAACCCCATCAGATCTTTCGCTTTCGCCGTCGCCATCGCCTTCCTCGTCCCCGGCCGCCATTGCTCCATCTCCTGCTCCTGTTGCATCACATGGAGTGCACATTCATGAACATTCCCACCCTCATCAGCTTCGCCTGCACAAGAGCCAACCAGTTTACAAGCCTAAAAGAGAAGATGGAGGAGAAGGCAGAGTCAGAAGAATTCTTGTTGCAGTTCTTGTATCTGCAGGAGCCACCATTTTGATATGCTCTATTGCTGCCTTCTGGGTCTGCAAGAAATTCAATAGCCAGAGAGATGAACCCACAGAGAAACTTTCTGTAAAGAATGAAACAGGAGAGAAGGCAACAAGACCAAAATCTGGCCTTGATCTGTTCGATCTCAGTTTACGTGGAAGGGATGTTGAAGAACAGACGCAAACTTCTGAAAGTGAAAAAGGGTTATCAGTTCACAAAGAAGGGGAGAGGGGCCAAGAGATGCTGGATTCAGAATTTGAAAATGTAAGTGTTTCTTCAACCAAGGAAATGGGGTATGTTCATGGGGAAGATGATGGGAAATCAATACAATGTGAATCTGATGGAGCTGATTCTTCTTCTGGGGAGAGGGTTACTCCTGTTAAATCTTGTTCTTCGGGTGATGATGAATCATTCCATTCTTGTGGTGATTCGAATTTGTCAAATCTTCGCCTTTCGAATGCTTCGGAATCTTCTTCTGCTAATGTGATAACAACAAACACTACTTGTTCAGTGCCGACTGTGAACTTATCAAATAAATTGGAAACCCAATTTGATGAATCTAACAAACCATTAACTTCTGATCAGTTGCATTTTACCCTTTCTCCTTGTAGTTCAGAACCCAAAGTGCAGATGGTTTCACAGTCTGCAGGTTTTCAAAAGAATATCCCATCTCTATCTCCGCCTCCACCGCCGCCGCCTCCTCCACCTCCACCTCCACTCACCGATCGCAGTTCCTTCTCCCTCTCTTCACCCTTTTCAACTGGATCTACCTCCTCCTCTGCATTGTTAAGATCATCATCTCCTGCAATGTCAGATTCTTCTTCAGCACTATCTCAAACACCATGGAATGATCTGCCATCGCCTCAAAATGGTACTAAACCTTCACAATCATCATCAACTATTCCTCCACCCCCTTGCCCACCACCAAGTTTAAGAACAAACTCTTACTCTTTCAAAACTCCACCTCCTCCTCCTTCCAAGCTCCCTCAATTCATGGCATTTGGAAAAGATGGAAATTTGCGGCCGAAACTGAAGCCTCTCCATTGGGACAAAGTAAGAGCTGCACCAGATCGATCAATGGTATGGGACAAACTAAGATGGAGTTCATTTGAGCTAGATGAAGAAATGATTGAGTCACTATTTGGATACAACCAACAAGATCCAATGAAAAATGGTGATACTAGCAACAAAAGCCCCTCTCCAAGCAAGCATATACTCGAGGCAAAGAGACTTCAGAACCTAACCATACTCCTAAAAGCCCTGAATCTATCAGCAGAACAAGTTTGTGAAGCAATAGAACAAGGGATTGGGTTGCGCTTAAGACAACTTGAAGCACTAGTAAAGATGGTACCAACACAGGAAGAAGAGGCCAAATTGTTAAGCTATGAAGGGGACATCAGTGAATTGGGGTGTACAGAGAAATTTGTCATAGCAATTCTGAGAATACCATTTGCCTTCCAACGAGTAGAAGCCATGCTTTACAGAGAAACTTTTGAAGATGAAGTGAATCATCTCCGGAATTCGTTTTCAATGCTAGAGGAGGCCTGCAAGGAACTAAGATCCAGCAGACTGTTCTTGAAATTACTGGAAGCCGTGCTGAAAACAGGGAACCGAATGAACGTCGGCACAAGCAGAGGAGGAGCTAGAGCATTCAAATTAGACGCGCTCCTCAAGCTCTCCGACGTCAAAGGAACCGACGGCAAAACCTCCCTACTCCACTTCGTGGTCCAAGAAATGATCCGATCAGAAGGAATCAGAGTATCCGGAAGCATAATGGGGAAAATCAGCCAGAAGAACAAATCCAGAACAATGGAAGAAAGGGAAGAGGATTACCGAAGAATGGGGCTGGATCTGGTGTCCGGCCTGAGCACCGAACTGTACAACGTGAAGCGAGCGGCGACGATCGATCTGAACGTCCTGGCAAGCTCCACCGCGTATCTGAACGAGGGAATCGCGAAACTGCAGCAACTGGTGAGCAACGACTTACGCGTGGATGAAAGGAGCCGGAATTTCGTCGCCGCCATGAAAGGGTTCTTGAATTACGTGAAGAAGGCGATGGAGGAGGTGCGGAGGGACGAAGAACGAGTGCGATCGTGCGTGAGAGAGATCACAGAATACTTCCATGGAAATGTGAGCAAAGAGGAGACGAATCCGCTCCGGATTTTCGTGATTGTGAGAGATTTTTTGGGGATGTTGGATAATGTTTGTAAGAGCTTCAAGATTGGAAGTTGA 2697 45.24 MGCVLNCVFMIVIFMSMPFPSHNSHILIANSLLNAAESFNVKELERVSGEDESGGNEPFILERVRALLGLKSLRLGNQTPSDLSLSPSPSPSSSPAAIAPSPAPVASHGVHIHEHSHPHQLRLHKSQPVYKPKREDGGEGRVRRILVAVLVSAGATILICSIAAFWVCKKFNSQRDEPTEKLSVKNETGEKATRPKSGLDLFDLSLRGRDVEEQTQTSESEKGLSVHKEGERGQEMLDSEFENVSVSSTKEMGYVHGEDDGKSIQCESDGADSSSGERVTPVKSCSSGDDESFHSCGDSNLSNLRLSNASESSSANVITTNTTCSVPTVNLSNKLETQFDESNKPLTSDQLHFTLSPCSSEPKVQMVSQSAGFQKNIPSLSPPPPPPPPPPPPPLTDRSSFSLSSPFSTGSTSSSALLRSSSPAMSDSSSALSQTPWNDLPSPQNGTKPSQSSSTIPPPPCPPPSLRTNSYSFKTPPPPPSKLPQFMAFGKDGNLRPKLKPLHWDKVRAAPDRSMVWDKLRWSSFELDEEMIESLFGYNQQDPMKNGDTSNKSPSPSKHILEAKRLQNLTILLKALNLSAEQVCEAIEQGIGLRLRQLEALVKMVPTQEEEAKLLSYEGDISELGCTEKFVIAILRIPFAFQRVEAMLYRETFEDEVNHLRNSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTSRGGARAFKLDALLKLSDVKGTDGKTSLLHFVVQEMIRSEGIRVSGSIMGKISQKNKSRTMEEREEDYRRMGLDLVSGLSTELYNVKRAATIDLNVLASSTAYLNEGIAKLQQLVSNDLRVDERSRNFVAAMKGFLNYVKKAMEEVRRDEERVRSCVREITEYFHGNVSKEETNPLRIFVIVRDFLGMLDNVCKSFKIGS 898
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 22799524 22804378 + MC06g1556 Mch6g2051 691498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g2051 898 MobiDBLite consensus disorder prediction 79 137 - -
Mch6g2051 898 MobiDBLite consensus disorder prediction 361 377 - -
Mch6g2051 898 MobiDBLite consensus disorder prediction 267 295 - -
Mch6g2051 898 SMART it6_source 489 896 IPR015425 -
Mch6g2051 898 MobiDBLite consensus disorder prediction 177 238 - -
Mch6g2051 898 MobiDBLite consensus disorder prediction 398 452 - -
Mch6g2051 898 Gene3D Formin, FH2 domain 490 895 IPR042201 -
Mch6g2051 898 ProSiteProfiles Formin homology-2 (FH2) domain profile. 489 898 IPR015425 -
Mch6g2051 898 SUPERFAMILY Formin homology 2 domain (FH2 domain) 502 892 - -
Mch6g2051 898 PANTHER FORMIN-RELATED 62 894 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Mch6g2051 898 MobiDBLite consensus disorder prediction 361 487 - -
Mch6g2051 898 Pfam Formin Homology 2 Domain 495 887 IPR015425 -
Mch6g2051 898 Coils Coil 837 857 - -
Mch6g2051 898 Coils Coil 650 670 - -
Mch6g2051 898 MobiDBLite consensus disorder prediction 253 295 - -
Mch6g2051 898 MobiDBLite consensus disorder prediction 177 241 - -
Mch6g2051 898 MobiDBLite consensus disorder prediction 378 397 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g2051 Mch-Chr6:22799524 Mch6g2239 Mch-Chr6:24610220 1.81E-107 dispersed
Mch6g2051 Mch-Chr6:22799524 Mch11g1148 Mch-Chr11:8056654 2.20E-107 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g2051 K28090 - csv:101208374 1279.23