Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g2071 ATGGCAATCTCTCTCCCATTCCTAAAATCTTCCGCTCTCTCTCTCGCCATTCTCTCTGTATTCATCTTCTTCATCGTATTCACTCCAAATCGGTCGCCGGAATCGCCTCCCAGAAGGTCTCTCATTGCCGCCGGCGATTTCAACTCCACTGCCTCGCCGACCCCGTCTTGTTCCTCCGTCGAATTCCGCTCCGATGGCCTCGTTAACTACTTGTATTTCCATTTCTGCTTCTTTAACCAAAACCCATCTCTCTCCGTCCCTTTTCTCACTCTCCTCCTCCTCCTGCACTTCTACATCCTCATCAAAACCGCTCAGGATCATTTCTCCATTGTCACTTCCAAGCTCGCCTTCCACCTCAACTTGTCTCCGAGTATGGCCGCCGTGACGCTCTTGGCGTTGGGCAATGGCGCTCCCGATGTATTCGCATCTGTTGCCGCGGTTCGTAGTGGACAGTATCGAACTGGGTTCGGTGCAATTCTCTCCGCGGGCACTTTTGTTTCGGCTTTTGTGGTTGGATTTGTGGCCATCTATGCTGCTCCCTTCTCGGTGAATCCGGCTCAGTTTGTGAGGGATGTGCTGTTTTATTTGACTGCAGCATTGTTCTTGTTCTATGTGTATCTCAGTGCGGAGATTTTTCTCTGGCAAGCTGTTGGGTTTGTTGGATTCTATCTGTTCTTTGTTGGGCTTGTGTTTTGGATGGATTTGGGAATGGGAAGTGGGAAAGCTAAGAGGGGGGCTGATATGGGAGTGGCTAGAGAAGCTGCGGTCTATAACGGTGAGGTGCCTCTAGACTGTGTGATTGGAGAAGGCTACAAAAATTTGGATGAAGAAAAGACAAATTTTGGCTTTTGGGAAGCTCTTGGAATGATCCCAAAAGTATGGGAGGCTCCTGTCTCGTTTCTTCTGAAGCTCACCATTCCGCAACCCGCACCTTCCAAATGGAGCAGATTCTTTACATCAGCAAATATTTCTCTCTGTCCCGTCGCCCTTCTATATTCCTGTAACTCATTCATGCCTTTTAATTATCCCATTGCTTTCCTCTTACCGCATACACATTTACCTCTTTGGTTCGTGGTACTCTTAGCAAGCTCCTCTCTTGCAATTGTTCACTTTGTCACCGAAACCGAGCCCCCCAAAACTGAGCAAGTCCCCGTCGTGCTTGCAGCATTTGTTATGAGTGTATTTTGGATTTCAGCCGTTGCTGGAGAACTTCTCAACTGTCTTGCAGCTCTCGGAGTGCTTCTCAAACTCCCGACAGCTCTACTCGGGCTTACCGTGCTTGCCTGGGGGAATTCGGTTGGGGATCTTGTGGCTGATGTTGCTCTTGCAAAAGCAGGCCAGCCTTTGCTGGCTATGGCTGGATGCTTTGCCGGACCTATGTTTAACATGCTCGTTGGGCTCGGAACGGCTTTGGTTATACAAACAGCTAACAGTTATCCAGAGGCCTATCAGCTTCATTTCCATATCGGAATCGTGATTGCATTTGTGTTCCTACTTTTCAGCTTGATGGGTTCCCTACTTGTAATTATTTGGTACAGATTTCGGGTGCCTCGGTTTTGGGGATTCTGCCTTGTTGTGCTCTATATTATTTTCACGGCTACCAGCTTAGTGATGGCCAAGTTTTCTGTATGA 1632 48.41 MAISLPFLKSSALSLAILSVFIFFIVFTPNRSPESPPRRSLIAAGDFNSTASPTPSCSSVEFRSDGLVNYLYFHFCFFNQNPSLSVPFLTLLLLLHFYILIKTAQDHFSIVTSKLAFHLNLSPSMAAVTLLALGNGAPDVFASVAAVRSGQYRTGFGAILSAGTFVSAFVVGFVAIYAAPFSVNPAQFVRDVLFYLTAALFLFYVYLSAEIFLWQAVGFVGFYLFFVGLVFWMDLGMGSGKAKRGADMGVAREAAVYNGEVPLDCVIGEGYKNLDEEKTNFGFWEALGMIPKVWEAPVSFLLKLTIPQPAPSKWSRFFTSANISLCPVALLYSCNSFMPFNYPIAFLLPHTHLPLWFVVLLASSSLAIVHFVTETEPPKTEQVPVVLAAFVMSVFWISAVAGELLNCLAALGVLLKLPTALLGLTVLAWGNSVGDLVADVALAKAGQPLLAMAGCFAGPMFNMLVGLGTALVIQTANSYPEAYQLHFHIGIVIAFVFLLFSLMGSLLVIIWYRFRVPRFWGFCLVVLYIIFTATSLVMAKFSV 543
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 22984606 22989079 - MC06g1573 Mch6g2071 691518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g2071 543 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 63 541 IPR051359 GO:0006812(PANTHER)|GO:0008324(PANTHER)|GO:0016020(PANTHER)
Mch6g2071 543 Pfam Sodium/calcium exchanger protein 387 536 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Mch6g2071 543 Pfam Sodium/calcium exchanger protein 91 232 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Mch6g2071 543 Gene3D - 322 537 IPR044880 -
Mch6g2071 543 Gene3D - 121 248 IPR044880 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g0984 Mch-Chr6:6935020 Mch6g2071 Mch-Chr6:22984606 3.65E-47 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g2071 K13754 - csv:101209909 876.315