Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g2077 ATGGAAGAAGTTAACAATTCAACTGCAGAAGCAGCACCAAGAAACCACATCCATAAGCACAACCATTCTCACTCTCAGACCTCCAACAATGGCCAACACCAACACCAACACCACCACCATCACCATGGCATTCTCAGCTCCAATTCATTTCTCATCATCATTGCCTCCATCATCTGCATCACCGTACTCGTCGCCATTCTCGTCCTCATCTTGATGCTGCAGCGCCTCAAATCGTCCCGAAACAAGCTGACCGCCTGCAGAGAATCAAACAGCAGCAGCAGCATCCACAACTCAAGCAACAGATTCATTCCCCACACAGCCATCAATTTTGACTCAAGCCCAGAAGTGAAGGGGGGCGGGTGCTTATATGGAGGGAATTCAGGGAGGATGCCACAGTACAGAATCAGAGGAGTCCAAGTTTTCACATATAAGGAGCTGGAAGTGGCCACTGAGAATTTCAGTGAGGCCAATGTGATTGGAAATGGAAGATTTGGAAGTGTGTACAGAGGGGTCCTTGCTGATGGAGCTGTGGTCGCAATTAAGATGCTGCACAGAGAAGGGAAGCAGAGAGAGCGTGCCTTCAGGATGGAGGTGGATCTCCTAAGCCGCTTGCACTCGCCTTGTTTGGTGGAGTTGCTTGGCTACTGCGCTGACCAACACCATAGGCTTCTGATATTTGAATTCATGCACAATGGTACTCTCCATCGTCATCTGCATAATCCAAACAGTGAATCTCGGCCGTTGGATTGGAATACTCGGTTAAGGATAGCCCTTGATTGTGCCAAGGCTCTCGAGTTCCTCCATGAGCATGCAGTCCCATCAGTGATCCATCGTAACTTCAAGTGCACCAATGTTCTTCTGGATCAGGATTTTCGAGCCAAGGTGTCCGATTTTGGATCGGCCAAGATGGGATCTGATAAGATCAACGGTCAAATATCTACACAAATTCTTGGAACCACAGGATATCTAGCACCAGAGTATGCTTCAACAGGTAAGCTTACAACAAAGTCAGATGTGTACAGCTATGGTGTTGTGCTGCTAGAACTATTGACAGGTCGTGTGCCAGTCGATATCAAGCGGCCACAGGGGGAGCATGTACTCGTCTCATGGGCTCTCCCAAGACTAACTAACAGAGAAAAAGTGGAGAAAATGGTGGACCCAGCTATTCAAGGAAAATACTCTAAGAAGGATCTAATTCAAGTAGCAGCCATTGCAGCGATGTGCGTGCAGCCCGAAGCAGACTACAGGCCACTAATGACTGATGTTGTGCAATCACTGATTCCTCTAGTTAAGAACCCGTCCTCGTCCTTGAGATTCTTGAATTGA 1326 47.89 MEEVNNSTAEAAPRNHIHKHNHSHSQTSNNGQHQHQHHHHHHGILSSNSFLIIIASIICITVLVAILVLILMLQRLKSSRNKLTACRESNSSSSIHNSSNRFIPHTAINFDSSPEVKGGGCLYGGNSGRMPQYRIRGVQVFTYKELEVATENFSEANVIGNGRFGSVYRGVLADGAVVAIKMLHREGKQRERAFRMEVDLLSRLHSPCLVELLGYCADQHHRLLIFEFMHNGTLHRHLHNPNSESRPLDWNTRLRIALDCAKALEFLHEHAVPSVIHRNFKCTNVLLDQDFRAKVSDFGSAKMGSDKINGQISTQILGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDIKRPQGEHVLVSWALPRLTNREKVEKMVDPAIQGKYSKKDLIQVAAIAAMCVQPEADYRPLMTDVVQSLIPLVKNPSSSLRFLN 441
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 23048029 23051352 + MC06g1579 Mch6g2077 691524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g2077 441 ProSitePatterns Protein kinases ATP-binding region signature. 159 181 IPR017441 GO:0005524(InterPro)
Mch6g2077 441 Gene3D Transferase(Phosphotransferase) domain 1 229 437 - -
Mch6g2077 441 FunFam Putative LRR receptor-like serine/threonine-protein kinase 130 228 - -
Mch6g2077 441 Pfam Protein tyrosine and serine/threonine kinase 157 426 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch6g2077 441 ProSiteProfiles Protein kinase domain profile. 153 430 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g2077 441 SUPERFAMILY Protein kinase-like (PK-like) 131 426 IPR011009 -
Mch6g2077 441 MobiDBLite consensus disorder prediction 1 41 - -
Mch6g2077 441 PANTHER OS01G0750732 PROTEIN 25 431 IPR050885 -
Mch6g2077 441 FunFam Receptor-like serine/threonine-protein kinase ALE2 229 439 - -
Mch6g2077 441 CDD STKc_IRAK 159 429 - -
Mch6g2077 441 Gene3D Phosphorylase Kinase; domain 1 125 228 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g2077 Mch-Chr6:23048029 Mch6g2305 Mch-Chr6:25035360 2.64E-97 dispersed
Mch9g1442 Mch-Chr9:16825558 Mch6g2077 Mch-Chr6:23048029 1.22E-37 dispersed
Mch6g2077 Mch-Chr6:23048029 Mch4g0126 Mch-Chr4:830538 5.99E-141 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77513 PF07714 PK_Tyr_Ser-Thr 1.00E-45 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g2077 - - - 0.0