Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g2118 ATGGAGCTCACACTTAAATGTGGCTTTTTCTGCCTGTTGGCTGTGCTCTTGCCTATGTTGTGCTTCTCTCAGGATGGTTTCGTCGCTTCGAGAGCCACTTATTATGGCAGCCCCGATTGCTACGGGACTCCATCGGGGGCTTGTGGATTCGGTGAATTTGGAAGGACAGTTAATGATGGCAATGTCGCTGCAGTTTCATATCTCTATCGGAATGGCTCTGGTTGTGGTGCATGCTATCAGGTTAGGTGCACCAATCCAACATATTGCAGTGATAGTGGAGCATATGTAGTGGTGACTGACCATGGTGAAGGGGATTACACTGACTTTATCTTGAGCCCACGAGCGTATGCAAAATTGGCCTATCCAAACACAGCCTTAGACTTGTTCTCTCGTGGTGTGGTGGATGTGGAATTCAGAAGGGTTTCTTGCCAATACCCTAATTACAACACTCTCAAGTTCAAGGTCCACGAGCACAGTAGATACCCTGATTACTTGGCCATTGTCGTCATCTACGTCGCTGGCAAAAACGACATCACCGCCGTCCAACTGTGGCAGGAGGATTGCAAAGAATGGAAGGGGATGAGGAGGTCCCATGGAGCAGTGTGGGACATGGCAAACCCACCAAAAGGAGACATAAAGCTGAGGTTCCAAGTGAGTGGAAGTTTGGGATATGGAAGGTGGGTGATGGCAAACAATGCCATCCCAAATTATTGGAAGGCAGGAGTTGCTTACGACACAGACATTCACCTCTATTAG 756 48.41 MELTLKCGFFCLLAVLLPMLCFSQDGFVASRATYYGSPDCYGTPSGACGFGEFGRTVNDGNVAAVSYLYRNGSGCGACYQVRCTNPTYCSDSGAYVVVTDHGEGDYTDFILSPRAYAKLAYPNTALDLFSRGVVDVEFRRVSCQYPNYNTLKFKVHEHSRYPDYLAIVVIYVAGKNDITAVQLWQEDCKEWKGMRRSHGAVWDMANPPKGDIKLRFQVSGSLGYGRWVMANNAIPNYWKAGVAYDTDIHLY 251
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 23421744 23424159 - MC06g1614 Mch6g2118 691565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g2118 251 PANTHER EXPANSIN-B3 10 249 - -
Mch6g2118 251 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 45 148 IPR007112 -
Mch6g2118 251 Gene3D - 19 143 IPR036908 -
Mch6g2118 251 PRINTS Expansin/Lol pI family signature 131 147 IPR007118 GO:0005576(InterPro)
Mch6g2118 251 PRINTS Expansin/Lol pI family signature 26 41 IPR007118 GO:0005576(InterPro)
Mch6g2118 251 PRINTS Expansin/Lol pI family signature 191 205 IPR007118 GO:0005576(InterPro)
Mch6g2118 251 PRINTS Expansin/Lol pI family signature 232 246 IPR007118 GO:0005576(InterPro)
Mch6g2118 251 PRINTS Expansin/Lol pI family signature 65 83 IPR007118 GO:0005576(InterPro)
Mch6g2118 251 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 163 246 IPR007117 -
Mch6g2118 251 CDD DPBB_EXLB_N 28 143 - -
Mch6g2118 251 SUPERFAMILY PHL pollen allergen 150 245 IPR036749 -
Mch6g2118 251 SUPERFAMILY Barwin-like endoglucanases 13 147 IPR036908 -
Mch6g2118 251 Gene3D - 144 247 IPR036749 -
Mch6g2118 251 Pfam Lytic transglycolase 65 138 IPR009009 -
Mch6g2118 251 Pfam Expansin C-terminal domain 152 235 IPR007117 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g2118 Mch-Chr6:23421744 Mch6g2139 Mch-Chr6:23785298 1.58E-72 dispersed
Mch6g2118 Mch-Chr6:23421744 Mch4g0162 Mch-Chr4:1101870 5.30E-32 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g2118 - - - 0.0