Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g2145 GCGGTTGTAATATTTGGTGTGGTTTTGTGTGGAATTGAAAGTTTAGGCGATGGAGAACATCTAGTTTTTGACTATTACAAAGAAACATGCCCTTTCGTCGAAGATATTGTTCGGCGACAGGTCGAGATTGCTGTGCTCAGAGATCCTCGAATGGCTGCTTCACTCCTCCGCTTGCATTTCCATGATTGTTTTGTTATGGGGTGTGATGCATCAATTCTTCTGGATAGCAATGAGGAGATGGTGAGCGAAAAACAAGCGGCTCCGAACCTTAACTCTCTGCGCGGGTTTAACGTCATTGATGAGATCAAGTACATACTGGAAGAAGCTTGTCCTCGTATTGTTTCGTGTGCTGATATTTTGACCATTGCAGCACGTGATGCTGTCTTGCTCAGAGGAGGACCTGGATGGGAAGTTTTGCTAGGAAGGAAAGACTCTTTGAAAGCAAGCTTTGATGGAGCCAACAAATACATCCCTTCTCCAAATGCCTCTCTTGAGACCCTCATTGCCAATTTTCAACAACAAGGCCTTGATGTGGGAGACTTGGTTGCTCTTTCAGGAAGCCACACCATAGGAAAAGCAAGATGCTTGAGCTTCAGACAAAGAGTATACCAAAAGAACCCAGAGGAAGAACATGACAGATACAAGGGGCACAACACATACAGAAGAGTTTTAAGGTCCATATGCCCTAAAACAGGGCAAGACCAGAGGATTGCACCCTTAGATTTTGGGACACCAGCAAGATTTGACAACCACTACTTCCTCAGCATTCTTCAAGGCAAAGGGCTTTTGGGGTCTGACAATGTGCTCATAACCCAAGACTATGAAGGTGACATAAGAAGACAAGTTTGGAGCTATGCCTCTGACCAAACCCTTTTCTTTGCTTCCTTTGTTAAGTCCATTGTCAAGATGGGGAACATCAATGTCCTCACTGCCCATCAAGGTGAAGTAAGGAAGAATTGTAGGGTTACCAATTACTAA 978 44.38 AVVIFGVVLCGIESLGDGEHLVFDYYKETCPFVEDIVRRQVEIAVLRDPRMAASLLRLHFHDCFVMGCDASILLDSNEEMVSEKQAAPNLNSLRGFNVIDEIKYILEEACPRIVSCADILTIAARDAVLLRGGPGWEVLLGRKDSLKASFDGANKYIPSPNASLETLIANFQQQGLDVGDLVALSGSHTIGKARCLSFRQRVYQKNPEEEHDRYKGHNTYRRVLRSICPKTGQDQRIAPLDFGTPARFDNHYFLSILQGKGLLGSDNVLITQDYEGDIRRQVWSYASDQTLFFASFVKSIVKMGNINVLTAHQGEVRKNCRVTNY 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 23836053 23837937 + MC06g1640 Mch6g2145 691592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g2145 325 Gene3D Peroxidase, domain 2 158 304 - -
Mch6g2145 325 PANTHER PEROXIDASE 72-RELATED 11 322 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch6g2145 325 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch6g2145 325 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch6g2145 325 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch6g2145 325 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch6g2145 325 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch6g2145 325 ProSiteProfiles Plant heme peroxidase family profile. 20 324 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch6g2145 325 Gene3D - 25 324 - -
Mch6g2145 325 FunFam Peroxidase 158 303 - -
Mch6g2145 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Mch6g2145 325 ProSitePatterns Peroxidases active site signature. 52 63 IPR019794 GO:0004601(InterPro)
Mch6g2145 325 CDD secretory_peroxidase 20 323 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Mch6g2145 325 FunFam Peroxidase 24 166 - -
Mch6g2145 325 SUPERFAMILY Heme-dependent peroxidases 21 324 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch6g2145 325 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch6g2145 325 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch6g2145 325 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch6g2145 325 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch6g2145 325 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch6g2145 325 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch6g2145 325 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch6g2145 325 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch6g2145 325 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch6g2145 325 Pfam Peroxidase 37 288 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g1240 Mch-Chr3:15491562 Mch6g2145 Mch-Chr6:23836053 5.26E-61 dispersed
Mch6g2145 Mch-Chr6:23836053 Mch9g2030 Mch-Chr9:21534314 6.86E-98 dispersed
Mch6g2145 Mch-Chr6:23836053 Mch10g0764 Mch-Chr10:5342204 9.98E-112 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g2145 K00430 - csv:116402797 541.191