Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch6g2213 | ATGGGTGGCAGTGAGACGAATAAATCAGTGAAGGAGGAATCCAAGACAACGCCTGCCACTATACAGGAGCAGTCTTCAAACACAAGCACTGGCACCGTTAATCCTGAATGGTCAGGATTTCAGGCATATTCTCCAATACCTCCACCTGGATATTTGGCAACAAGCCCCCAAGCACACCCATATATGTGGGGGGTACAGCATATTATGCCCCCTTATGGAACCCCTCCACATCCATATGTTGCAATGTATCCCCACGGTGGCATATATGCTCATCCGCCCATGCCTCCGGGATCATATCCTTACAGCCCTTTTGCTATAGCTTCTCCGAATGGCATTGCTGAGGCTTCTGGGAATACACCAGGCAACATGGAAGGGGAGGGTAAGCCTTCTGAGCTGAAAGAAAAATTGCCAATTAAAAGATCGAAAGGAAGTCTGGGAAGTTTAAGCATGATAACTGGGAAGAACAATGAGCTTGGTAAACCATCCGGAACATCTGCTAACGGAGTTTATTCTAAAAGTGCTGAAAGTGAAAGTGAAGGTACAAGTGAAAGAAGTGATGCTGATTCTCAAAGTGATTCACAACTAAAATCTGGTTCTGGGAAAGATTCTTTAGAAGGTGGAGCGAATCCTAATGGTTTGATCCATGGTTCTCAGAATGAAGGACATAGTCTCGCTCATCCATTGGTGAATCAAACAATGTCCATATTACCAGTTCAAGCTTCTGCTGCTGTTACAGGTCCTGCTACGAATTTGAATATAGGAATGGACTATTGGGGTGCGCCAACAACTTCTGTCGTCCCTTCGATGTGCGGGAAGGTCCCTTCGGGTCCGATTACTGGAGGTGTTGCTGCTGGATCACGGGACAGTGTTCAGTCCCAGCTTTGGTTACAGGATGAAAGAGAGCTGAAAAGACAGAGAAGGAAGCAGTCAAATAGAGAATCTGCACGGAGATCTCGGTTGCGTAAACAGGCTGAATGTGACGAGCTGTCTCAGCGTGCGGAAGCTTTAAAGGAAGAAAATGCGAGTCTTAGATCCGAAGTGGATAGGATTAGGAGTGAGTACGAGCAACTTCTTTCAGAGAATGCCTCTCTCAAGAGGAGGCTTGGAGAAAGCGATGGAAATGAAGATACAAGATCTGCCAAAAATGGCCAAAATTCGATTAAAGAAGATCAGTATACAGCCCGGGCTGAACCCACGAAGGGGTGA | 1206 | 46.35 | MGGSETNKSVKEESKTTPATIQEQSSNTSTGTVNPEWSGFQAYSPIPPPGYLATSPQAHPYMWGVQHIMPPYGTPPHPYVAMYPHGGIYAHPPMPPGSYPYSPFAIASPNGIAEASGNTPGNMEGEGKPSELKEKLPIKRSKGSLGSLSMITGKNNELGKPSGTSANGVYSKSAESESEGTSERSDADSQSDSQLKSGSGKDSLEGGANPNGLIHGSQNEGHSLAHPLVNQTMSILPVQASAAVTGPATNLNIGMDYWGAPTTSVVPSMCGKVPSGPITGGVAAGSRDSVQSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELSQRAEALKEENASLRSEVDRIRSEYEQLLSENASLKRRLGESDGNEDTRSAKNGQNSIKEDQYTARAEPTKG | 401 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 24410228 | 24417413 | - | MC06g1696 | Mch6g2213 | 691660 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch6g2213 | 401 | CDD | bZIP_plant_GBF1 | 304 | 354 | IPR045314 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch6g2213 | 401 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 306 | 321 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch6g2213 | 401 | Pfam | bZIP transcription factor | 299 | 361 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch6g2213 | 401 | SUPERFAMILY | Leucine zipper domain | 302 | 358 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch6g2213 | 401 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - | |
Mch6g2213 | 401 | PANTHER | G-BOX-BINDING FACTOR 3-RELATED | 22 | 382 | IPR044827 | GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0006355(InterPro)|GO:0043565(InterPro)|GO:0043565(PANTHER) | |
Mch6g2213 | 401 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
Mch6g2213 | 401 | MobiDBLite | consensus disorder prediction | 145 | 176 | - | - | |
Mch6g2213 | 401 | Pfam | Disordered region downstream of MFMR | 134 | 267 | - | - | |
Mch6g2213 | 401 | Gene3D | - | 302 | 356 | - | - | |
Mch6g2213 | 401 | MobiDBLite | consensus disorder prediction | 301 | 321 | - | - | |
Mch6g2213 | 401 | MobiDBLite | consensus disorder prediction | 358 | 401 | - | - | |
Mch6g2213 | 401 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 301 | 364 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch6g2213 | 401 | Pfam | G-box binding protein MFMR | 1 | 95 | IPR012900 | - | |
Mch6g2213 | 401 | MobiDBLite | consensus disorder prediction | 113 | 222 | - | - | |
Mch6g2213 | 401 | SMART | brlzneu | 299 | 363 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch6g2213 | 401 | MobiDBLite | consensus disorder prediction | 378 | 392 | - | - | |
Mch6g2213 | 401 | Coils | Coil | 312 | 367 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch1g1486 | Mch-Chr1:16380469 | Mch6g2213 | Mch-Chr6:24410228 | 4.69E-34 | dispersed | |
Mch5g0446 | Mch-Chr5:3012937 | Mch6g2213 | Mch-Chr6:24410228 | 4.55E-32 | transposed | |
Mch10g1695 | Mch-Chr10:17017979 | Mch6g2213 | Mch-Chr6:24410228 | 4.52E-148 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
43628 | PF16596 | MFMR_assoc | 1.20E-46 | No_clan | Mch | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch6g2213 | K09060 | - | csv:101214217 | 723.005 |