Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g2234 ATGTCCCTCCTCAGTAGGTTTTTTTACAGAAGACCCCCAGATGGGTTGCTGGAATTTGTTGAACGAGTGTATATTTTTGATTCGTGCTTCTCCACTGAAGTGTTACCCGATGGTATGTACCAAATATATCTGCATGGGATTGTCAACGAATTACATGAAGAATTCCCAGACTCTTCCTTCCTTGCATTTAATTTTCGTGAAGGGGAGAAAAGGAGCCAGTTTTCAGAAATGTTGTGTGAATATGATGTCACTGTGATGGATTATCCTCGACAATATGAAGGTTGCCCTCTTCTTCCACTGTCCTTGATACAGCACTTCCTCCGTGTTTGTGAGAGCTGGCTTCTGCTTGGTAATCAACAAAATATCATTCTTCTCCACTGCGAGAGGGGAGGTTGGCCACTCTTAGCTTTCCTTTTGTCTAGCTTTTTGATTTATAGAAAATTGCACAGTGGTGAGAGGAAAACTCTTGAAATTGTACATCGAGAAGCCCCCAAAGGGTTTTTGCAGCTCTTGTCACCATTAAATCCGTTCCCATCTCAGCTTCGCTACTTGCAATATGTTGCAAGGAGAAATATAGTCTCAGAGTGGCCACCGCCCGAGCGAGCACTTTCTTTAGATTGTGTAATTCTTCGTGGCATTCCGGGTTTTGATTCTCAGAATGGATGCAGACCTGTAATTCGTATTTTTGGGAGGAATCTTTTCAGCAAGGGTGGGCTTTCCACACAGATGATTTTCTCCATGCCCAAGAAGAACAAGACCCTCCGTCACTACCATCAGGCAGATTGCGATGTGATTAAAATAGATGTGCAGTGTTTGGTTCAAGGAGATGTAGTGTTGGAGTGTTCACATTTGGAATTGGAACAAGAAAGGGAAGTCATGATGTTTCGTATTATGTTCAATACAGCATTTATCAGATCAAACATACTGATGCTGAACTCTGAAAATTTGGACATTCTTTGGGATTCAAAGGAGCGGTATCCAAAAGGCTTTCGAGCTGAGGTTTTGTTTGGGGAGATAGAAAGCATCTCTCCTGCAAGGGCTCCGATCACAATTTTGAATGGTGAAGAGAAAGGTGGATTGCCAATTGAAGCTTTTTCTAGAGTCCAAGAACTTTTTAGTGGTGCCGACTGGATTGATAGCAATGATGATGCTGCCTTGTGGCTACTCAAGAATCTTTCTGTCTTGAGTGATGTGAAAGAACTGTCAAGATTGCAAAATAGAACAAGTTCATATTCCTCCCCTGTGGATTCTGAAGAGGAAAATTATACGTCTAGCACTGCCGATAGTTCGGATGAAATATTTGATATTATTACAAAGCCTGCTATTGTAGATTCTTCTGAATTATTGTCTGGTAAAATTAGTGCTAATGAAGTGAATATTTCATCAGAATCTCCTCAAACTCTTGATGAAGATTCAGATAAGGTTTTCTTGGTTAAAGAATCTCTACCCTCTTCATCACCTCCACCCGTTTCTTTTGGTTCCTTGGCCCCGCCCCCTCCTATGAGTTCTTCTCTAATGCCTCTACCAAATCTACCATTTACTAATGCTAGTGAGGAACTTGTCTCAGATAAACCGACACCCACTATTAAAGTGATTCCTCCACCTCCACCACCGCCTCCTTCTCTATCTCACAATGAATCTCATGTGGAAACTTCCACGAGCTCTAATTCTACCTTCCAAGCAATGTATGGGAGACCCCCTCCACCTCCACCTCCACCTCCACCTCAGTATTCTCCTAGTAATGATTCTATTACCACCTCTTTGACACCATCACTTTCACCTGTTCCTAAATCTTCTGATGCTCCTCCACCTCCACCTCCGCCACCTCCTCTTGTTCCAAAATCTTCTGGTGCTCCTCCACCTCCACCACCTCCTCTTGTTCCAAAATCTTCTGGTGCTCCTCCACCTCTAGTGCCAAAACCTTCTGGTGCTACCCCATCTCCTCCTCTGCCTCCAATTCCAAAACCTTCTAGTGCTCCTCCTCCTTCTCCTCCACCTTCTATTCAGAGATCTTTTGGTCCTCCACCTCCACCTCCGCCTCCTATTCCGAATTCTTCAAGTGCCCCTCCACCTCCACCTCCGCCTCCTATTCCAAAATCTTCAAGTGCTCCTCCACCTCCACCTCCGCCTCCTATTCCGAAATCTTCAAGTGCTCCTCCACCTCCACCTCCGCCTCCTATTCCGAAATCTTCAAGTGCTCCTCCACCTCCACCTCCACCTCCCATTTCAAAATCATCTAGTGCTCCTCCACCTCCGCCTCCACCTCCGCCTACGCAATCAAATCGTAGTGTGACACCAATTCCACCTCCTCCACCACCAAAACCTCCCGGTGTTGAGCTACCAAGTCATGGTACTAAACCAACCAAACCTCCCCCACCTCCTCCACCAGCAAAGCCCTTCAATGCTCATCCTCCATTGACAAGTCATGGTGCTACACCAATGCCACCCCCTCCCCCTGGATCAAGAGGTCCAAATGTGCCACCACCGCCCCCTCCTTCTGTTGGAAGGGGGAAAAGTTCTCTTGGATCAACAACTCAAGGTAGAGGTCGAGTTGCTACAGGAGCTGTAAGTGCTCCAAAGAGAACCACTTTAAAACCATTGCACTGGGTAAAAGTTACTCGAGCAATGCAGGGGAGTTTATGGGCCGACTCCCAAAAGCAAGAAAATCAATCAAGGGCCCCAGAAATAGACATCTCTGAACTTGAAAGTCTATTCTCAGCTGCCTCTGCTTCAGATGGAAGTGGCAGTAAAGGTGGAGGACGACGTGGTTCCAACATCCACAAACCTGAAAAAGTGCAACTGGTTGACTTGCGGAGAGCATACAACTGTGAAATAATGCTCTCAAAAATAAAGATTCCTCTTCCGGATATGATAAATTCAGTTCTTGCATTGGATTCTTCTGCTCTTGATATTGACCAGGTCGAGAATCTCATTAAGTTTTGTCCTACGAGGGAAGAGATGGAAACATTAAGGAGTTATACTGGTGACAGAGAAATGCTTGGAAAGTGTGAGCAGTTTTTTCTCGAGCTAATGAAGGTTCCACGAATAGAGTCCAAGTTAAGAGTATTTGCTTTCAAAATCACCTTCTCCAGTCAGGTGAATGATTTGAGGTATAATTTGAACACAATAAATGATGCTACAAGAGAGGTAAAAGAATCTGCAAAATTGCGTCAGATTATGCAAACAATTCTTACTCTGGGAAATGCATTGAACCAGGGTACCACTCGAGGCTCTGCTATTGGTTTTAAGTTGGACAGCCTCCTTAAATTGTCTGATACTCGTGCAAGAAACAACAAAATGACTTTGATGCATTATTTATGTAAGCTCCTTTCAGAGAAAATGCCAGAGTTACTAGATTTTGACAAGGACCTTCTTCATTTAGAAGCTGCCTCTAAGATTCAATTGAAAGCATTGGCTGAAGAAATGCAAGCAGTGAGTAGAGGTCTTGAAAAAGTGGAGCAAGAGTTAACTGCTTCAGAAAATGATGGTGCCATCTCCATTGGTTTCCGGGAGGTGCTGAAAAATTTTCTTGATACTGCCGAAGCTGAAGTAAGGGGACTTATCTCCTTATATTCTGAAGTGGTAAGTCAAGTTAGCAAAATTTTCATTCTAGAAAGTGTACACACCCCCCCCCCCCCCCCCCCCCCCCCCCCCATNTCATTATCCCAGTACTTCGGCGAGGATCCAGCTCGGTGCCCCTTTGAGCAAGTGACTCAAATTTTGATAGTCTTCGTTAGGATGTTCAAGAAATCACGAGAAGAAAATGAAAGGCAGGCTGATGCTGAAAAGAAAAAAATCGAGAAGGAAGCGATGAAAGAACGAAGTTCGGTTAAAGCAAAGTGA 3843 44.42 MSLLSRFFYRRPPDGLLEFVERVYIFDSCFSTEVLPDGMYQIYLHGIVNELHEEFPDSSFLAFNFREGEKRSQFSEMLCEYDVTVMDYPRQYEGCPLLPLSLIQHFLRVCESWLLLGNQQNIILLHCERGGWPLLAFLLSSFLIYRKLHSGERKTLEIVHREAPKGFLQLLSPLNPFPSQLRYLQYVARRNIVSEWPPPERALSLDCVILRGIPGFDSQNGCRPVIRIFGRNLFSKGGLSTQMIFSMPKKNKTLRHYHQADCDVIKIDVQCLVQGDVVLECSHLELEQEREVMMFRIMFNTAFIRSNILMLNSENLDILWDSKERYPKGFRAEVLFGEIESISPARAPITILNGEEKGGLPIEAFSRVQELFSGADWIDSNDDAALWLLKNLSVLSDVKELSRLQNRTSSYSSPVDSEEENYTSSTADSSDEIFDIITKPAIVDSSELLSGKISANEVNISSESPQTLDEDSDKVFLVKESLPSSSPPPVSFGSLAPPPPMSSSLMPLPNLPFTNASEELVSDKPTPTIKVIPPPPPPPPSLSHNESHVETSTSSNSTFQAMYGRPPPPPPPPPPQYSPSNDSITTSLTPSLSPVPKSSDAPPPPPPPPPLVPKSSGAPPPPPPPLVPKSSGAPPPLVPKPSGATPSPPLPPIPKPSSAPPPSPPPSIQRSFGPPPPPPPPIPNSSSAPPPPPPPPIPKSSSAPPPPPPPPIPKSSSAPPPPPPPPIPKSSSAPPPPPPPPISKSSSAPPPPPPPPPTQSNRSVTPIPPPPPPKPPGVELPSHGTKPTKPPPPPPPAKPFNAHPPLTSHGATPMPPPPPGSRGPNVPPPPPPSVGRGKSSLGSTTQGRGRVATGAVSAPKRTTLKPLHWVKVTRAMQGSLWADSQKQENQSRAPEIDISELESLFSAASASDGSGSKGGGRRGSNIHKPEKVQLVDLRRAYNCEIMLSKIKIPLPDMINSVLALDSSALDIDQVENLIKFCPTREEMETLRSYTGDREMLGKCEQFFLELMKVPRIESKLRVFAFKITFSSQVNDLRYNLNTINDATREVKESAKLRQIMQTILTLGNALNQGTTRGSAIGFKLDSLLKLSDTRARNNKMTLMHYLCKLLSEKMPELLDFDKDLLHLEAASKIQLKALAEEMQAVSRGLEKVEQELTASENDGAISIGFREVLKNFLDTAEAEVRGLISLYSEVVSQVSKIFILESVHTPPPPPPPPPXSLSQYFGEDPARCPFEQVTQILIVFVRMFKKSREENERQADAEKKKIEKEAMKERSSVKAK 1280
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 24548290 24563416 + MC06g1715 Mch6g2234 691681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g2234 1280 MobiDBLite consensus disorder prediction 1206 1225 - -
Mch6g2234 1280 MobiDBLite consensus disorder prediction 580 595 - -
Mch6g2234 1280 Pfam Formin Homology 2 Domain 859 1201 IPR015425 -
Mch6g2234 1280 Gene3D Protein tyrosine phosphatase superfamily 16 191 IPR029021 -
Mch6g2234 1280 Coils Coil 1135 1162 - -
Mch6g2234 1280 Gene3D - 197 342 - -
Mch6g2234 1280 MobiDBLite consensus disorder prediction 563 579 - -
Mch6g2234 1280 PANTHER FORMIN-J 753 1272 IPR051144 -
Mch6g2234 1280 Coils Coil 1249 1272 - -
Mch6g2234 1280 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 339 IPR035892 -
Mch6g2234 1280 MobiDBLite consensus disorder prediction 809 835 - -
Mch6g2234 1280 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 17 187 IPR029021 -
Mch6g2234 1280 MobiDBLite consensus disorder prediction 544 562 - -
Mch6g2234 1280 MobiDBLite consensus disorder prediction 462 860 - -
Mch6g2234 1280 SMART PTEN_C2_2 198 338 IPR014020 -
Mch6g2234 1280 MobiDBLite consensus disorder prediction 528 543 - -
Mch6g2234 1280 Gene3D Formin, FH2 domain 855 1260 IPR042201 -
Mch6g2234 1280 ProSiteProfiles Formin homology-2 (FH2) domain profile. 854 1274 IPR015425 -
Mch6g2234 1280 MobiDBLite consensus disorder prediction 490 506 - -
Mch6g2234 1280 MobiDBLite consensus disorder prediction 1254 1280 - -
Mch6g2234 1280 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1220 1268 - -
Mch6g2234 1280 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Mch6g2234 1280 MobiDBLite consensus disorder prediction 837 851 - -
Mch6g2234 1280 Pfam C2 domain of PTEN tumour-suppressor protein 198 338 IPR014020 -
Mch6g2234 1280 MobiDBLite consensus disorder prediction 881 927 - -
Mch6g2234 1280 SUPERFAMILY Formin homology 2 domain (FH2 domain) 867 1201 - -
Mch6g2234 1280 SMART it6_source 519 1280 IPR015425 -
Mch6g2234 1280 MobiDBLite consensus disorder prediction 596 802 - -
Mch6g2234 1280 MobiDBLite consensus disorder prediction 1207 1222 - -
Mch6g2234 1280 MobiDBLite consensus disorder prediction 507 522 - -
Mch6g2234 1280 MobiDBLite consensus disorder prediction 881 896 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g2234 Mch-Chr6:24548290 Mch6g0629 Mch-Chr6:4253783 5.12E-275 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g2234 K28090 - csv:101217517 917.531