Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g2239 ATGCGTATCTTCTTCTTTCTCTTCATTTTCTTTGTTCCTTGTAAATCTACGCAAGTTTCTGCCATTAGCCGTAGATTGCTGCACCAGCCTTTCTTCCCACTTGATTCTGTGCCTCCGGCGGAGCCGCCGTCTCCTCCGCTGCCTCCGCCGCCGAATCCCAAGTACCCATTTGCCACTACTCCTCCTGCAACTCCTGATGGGTCGCCATTTTTTCCGACCTATCCTGGAACCCCTCCTCCTCCGACGCCGGCCAGCTTCGCGTCGTTTCCGGCTAATATTTCCTCCCTCATTCTCCCTCATTCGTCTCAGTCGAGTTCCGGTTCCAAGAAGCTTGTTCCCTTGGCGATTGCTGCGGTTGTTTCCGCCGTCTTGGTCGTCTGCATTGCCGGGTTTTTGTACTGGCGGCGGCGGCGGGGACGTGGGTTGGCCGACGACAAGACGTTCAGATCCGAAAACAGTAGTCGGTTGTGCCCTGTTCCGAATGTTGAAGTTAATAATGGAATCCCTAAATTGAGACATCCCTCTGCTACTAGCTCTGAGTTTCTGTATTTGGGCACTCTCGTGAACTCGAGAGGAATCGACGATCGGTCCGATTCGCGAATCGGAGGGGGAGCTCGTGTTGCTGATCCTAGGCCGTTGGATTCGCCGGAGCTTCATCCGCTTCCGCCGCTCAATTTTGGTCGGTCGAGTGAGAAGCACAACGGTGGAAATGGGGAGGAGAGGTCGATTGGGGATGAAGAGGAAGAGGAATTTTACTCTCCTAAAGGTTCTCTCGGTGCGAATGGTTCGGGATCTCGGAGGGTGCTCGCTGCAATGGCGGCCGATGATTTGCTTGGGAAAAGCACCGATTCGAGCTCCACTTCGTATTCCACATCCAGCGGTTCCGTTTCGCCGGCGAGATCGCGTTCTAAAAGTCCCTCTCTATCTCCACCGGCGAGCTTGAGCCCTAGAAGATCCGTCCAAAATGAATCTCCCAATTTCTCCGTTTCTGCCACTGCCGCGACGGAGCAGCAGCATTCACCGCCGCTTTCCCACGGAGGTGCGGAATCGGACGACAGCGGCCAATCCCATTGCCCATCTCCTCTGCGTTTATCGACGGAGAAAGTTCCGGAGAAGAGCTCCGCGGCTTCTTCATCGCGAAACTCCAATGTTTCTGTTCACAGTGCGATTTTCCCAATTTCAACAATCAATAAAAATTTAGATAATCTTCCAGTTTCTGCTCACAACGATCGCGAAGAATCTCCAAGACAATCCCGTAATTCAGATCCAGAAGAGCAGTTCCCTTCTTCTCCTTGCTTATCTCCGCTCTCAGATGGAATTTTAGGGCAAATTCAGATTCAATTACCCAAAGTTTCAAACATTCCCGATTCGGATTCCGATGCAAAACTTAAGCAATTTTCTTACTCATTTACTTCATCTTCAGCTTCGTCATCGCCGGAGAGAGTAGTCTTGGACTCGTCTCCGTCAAGAGCATCCAATATTTCAGATCAAAACAGGTCACCTCCATTATCACCGGAGAGAATTTTGCTGAGTGATTCAGATACATCGAAGAGAACCTCCGGCCATTTTGATCAAAGAAACCTGCAGCCCCCTTCAGGTTCATCCGCCCCTCCTCCGCCACCGCCTCCTCCGCCGCCGCCACCACTGGCACCCCCTCTGCCAGTCCGGTGGGAAATCCCCATTTCTCCTTCAACACCAATGGACCAATCAATTTCAAGGGCGCCTCCTCCATTAGTGCCACCTTTAAGGCCGTTTATAATGGAGAATGTGAAAAATGTCTCACCCATTCAGTTGCCATCCTGCAAAAGCAATAGTGAAGCATCTGGAGACACCCCCAAGCCCAAATTGAAGCCATTGCATTGGGACAAAGTAAGGGCCAGCTCTGATCGTGAGATGGTGTGGGATCAACTCAGATCAAGCTCTTTTAAAGTGAACGAGGAAATGATTGAAACTCTTTTCATTGTGAACACTTCCAACTCGAAGGAGACTACACCTCGCCCTGTGCTTCCTATACCTAACCAAGAGATTGGAGTTCTTGATCCCAAAAAGTCACAGAACATTGCAATCGCACTACGAGCGCTGAATGTGACTCTAGAAGAAGTTTGCGATGCCCTTTTAGAAGGTAATGCAGATGCACTTGGAACAGAGCTACTTGAAAGTTTATTGAAGATGGCACCAACAAAAGAAGAAGAACGTAAACTTAAGGAATGCAAAGATGTTTCGCCTACCAAGCTTGGCCCTGCTGAGAAATTTTTAAAGGCAGTCCTTGATGTTCCCTTTGCATTTAAAAGGGTGGATGCGATGCTATATGTGGCAAATTTCGAGTCCGAGACCGAGTACCTAAAGAAGTCGTTTGAAAATCTGGAGACTGCCTGTGAAGAATTGAGGAACAGCAGAATGTTCTTGAAACTTTTGGAAGCTGTTCTCAAGACCGGGAATCGCATGAACGTTGGCACTAACCGTGGGGATGCCCATGCCTTCAAACTTGACACACTTCTGAAGCTTGTCGATGTCAAGGGTGCAGATGGAAAGACCACTCTTCTGCATTTTGTCGTACAAGAAATCATAAGAAGTGAAGGGGCTCGTCTTTGTGGCACGAGTCAAACTCCAAACTCCAACCTCAGCGACGATGTCAAATGCAGGAAACTCGGCCTGCAAGTTGTTTCTGGTCTCAGCTCGGAGCTTGCCAACGTAAAGAAGGCAGCTTCAATGGATTCCGACGTGCTCAGCGGCGAGGTCCTCAAGCTCTCGAGAGGACTCAACAACATTAGGGAGGCTCTGCGTTTAAACGAAGCAGCCGGGCCAAACGAAAGCACAGAAAAGTTCTCAGAGTCAATGGGCAGATTCTTGAAAATGGCAGAGGAGGAGATCATAAGAATCCAAGCCCATGAAAGTGTTGCTTTATCTCTAGTAAAGGAGATCACAGAGTACTTCCATGGCAACTCTGCAAAAGAAGAAGCTCACCCATTCAGAATTTTCATGGTGGTGCGAGATTTTCTGACAACCCTGGATGGAGTCTGCAAGGAAGTCGGGATGATAAACGAGCGGACGATCGTAAGTTCCGCCCATAAATTTCCAGTTCCAGTGAATCCAACATTACCACAAGCATTCCAAGCTCATCATAGAGTGCAGAAATACAACTCATCTGATGAAGAAAGTGAAGAATAA 3168 49.08 MRIFFFLFIFFVPCKSTQVSAISRRLLHQPFFPLDSVPPAEPPSPPLPPPPNPKYPFATTPPATPDGSPFFPTYPGTPPPPTPASFASFPANISSLILPHSSQSSSGSKKLVPLAIAAVVSAVLVVCIAGFLYWRRRRGRGLADDKTFRSENSSRLCPVPNVEVNNGIPKLRHPSATSSEFLYLGTLVNSRGIDDRSDSRIGGGARVADPRPLDSPELHPLPPLNFGRSSEKHNGGNGEERSIGDEEEEEFYSPKGSLGANGSGSRRVLAAMAADDLLGKSTDSSSTSYSTSSGSVSPARSRSKSPSLSPPASLSPRRSVQNESPNFSVSATAATEQQHSPPLSHGGAESDDSGQSHCPSPLRLSTEKVPEKSSAASSSRNSNVSVHSAIFPISTINKNLDNLPVSAHNDREESPRQSRNSDPEEQFPSSPCLSPLSDGILGQIQIQLPKVSNIPDSDSDAKLKQFSYSFTSSSASSSPERVVLDSSPSRASNISDQNRSPPLSPERILLSDSDTSKRTSGHFDQRNLQPPSGSSAPPPPPPPPPPPPLAPPLPVRWEIPISPSTPMDQSISRAPPPLVPPLRPFIMENVKNVSPIQLPSCKSNSEASGDTPKPKLKPLHWDKVRASSDREMVWDQLRSSSFKVNEEMIETLFIVNTSNSKETTPRPVLPIPNQEIGVLDPKKSQNIAIALRALNVTLEEVCDALLEGNADALGTELLESLLKMAPTKEEERKLKECKDVSPTKLGPAEKFLKAVLDVPFAFKRVDAMLYVANFESETEYLKKSFENLETACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRSEGARLCGTSQTPNSNLSDDVKCRKLGLQVVSGLSSELANVKKAASMDSDVLSGEVLKLSRGLNNIREALRLNEAAGPNESTEKFSESMGRFLKMAEEEIIRIQAHESVALSLVKEITEYFHGNSAKEEAHPFRIFMVVRDFLTTLDGVCKEVGMINERTIVSSAHKFPVPVNPTLPQAFQAHHRVQKYNSSDEESEE 1055
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 24610220 24614804 + MC06g1720 Mch6g2239 691686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g2239 1055 PANTHER FORMIN-RELATED 398 1051 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Mch6g2239 1055 SMART it6_source 606 1018 IPR015425 -
Mch6g2239 1055 SUPERFAMILY Formin homology 2 domain (FH2 domain) 538 1014 - -
Mch6g2239 1055 MobiDBLite consensus disorder prediction 370 404 - -
Mch6g2239 1055 MobiDBLite consensus disorder prediction 469 504 - -
Mch6g2239 1055 Pfam Formin Homology 2 Domain 610 1003 IPR015425 -
Mch6g2239 1055 MobiDBLite consensus disorder prediction 532 559 - -
Mch6g2239 1055 Gene3D Formin, FH2 domain 611 1024 IPR042201 -
Mch6g2239 1055 MobiDBLite consensus disorder prediction 39 61 - -
Mch6g2239 1055 MobiDBLite consensus disorder prediction 405 420 - -
Mch6g2239 1055 MobiDBLite consensus disorder prediction 469 574 - -
Mch6g2239 1055 MobiDBLite consensus disorder prediction 279 438 - -
Mch6g2239 1055 MobiDBLite consensus disorder prediction 597 618 - -
Mch6g2239 1055 MobiDBLite consensus disorder prediction 194 264 - -
Mch6g2239 1055 ProSiteProfiles Formin homology-2 (FH2) domain profile. 606 1029 IPR015425 -
Mch6g2239 1055 MobiDBLite consensus disorder prediction 279 362 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0617 Mch-Chr2:4239331 Mch6g2239 Mch-Chr6:24610220 9.76E-105 dispersed
Mch2g1335 Mch-Chr2:9454495 Mch6g2239 Mch-Chr6:24610220 6.22E-163 dispersed
Mch6g2051 Mch-Chr6:22799524 Mch6g2239 Mch-Chr6:24610220 1.81E-107 dispersed
Mch6g2239 Mch-Chr6:24610220 Mch9g1150 Mch-Chr9:12132431 3.56E-154 dispersed
Mch6g2239 Mch-Chr6:24610220 Mch11g1148 Mch-Chr11:8056654 1.03E-105 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g2239 K28090 - csv:101211678 1525.38