Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g2246 GAGAAAATGTCTATGACAATATCTGAACAGAAAGCAGCTGCAAAGGAGCTTCGCATGTTGACAAAGCGGATGCCCTCATTTCGAGCACTTTTTGGTGAGTCCCTTGATGCGATCTCTTCGCTGCTTAGTCCACTTTGTGGAGATAATTCACAAAGCAGTATTCACACCGACCTGCAAGAAGATGTGATTACGACCCTCCTGAATCTGTCAATCCATGACAACAACAAAAAGCTTGTTGCTGAAACTCCCAAGGTAATACCTCTTCTCATGGAGGCGTTGAGATCGGGAACCATGGAAACGAGGAGCAATGCTGCTGCAGCCCTTTTTACTTTGTCTGCTCTCGACTCAAACAAAGCACTTATCGGGAAATCTGGTGCCTTGGAACCGCTTATCGACCTTTTAGATGAGGGACATCCATTAGCTATCAAAGATGCTGCTTCAGCAATATTCAATCTTTGTATAATTCATGAAAACAAAGCAAGAGCTGTGCGAGATGGTGCAGTTAGAGTGCTTCTAAAAAAGATCATGAAGCAAATGCATGTTGATGAATTGTTGGCTATTCTTGCAATGCTTTCAAACCATCCAAAAGCTATCGAAGAAATGGGAGAACTTGGAGCTGTTCCTTTCTTGCTCAGAATTATCAGAGAAAGTCCTTGTTCACGTAACAAGGAGAATTGCATCGTGATCATCCATGCTATCTGCTTATATGATCGCACGAAGTGGAAGGACATAAGGGAGGAGGAGAAAAGCTATCGAACTATCTCCGAACTTGCTCAGAATGGGACTTCAAGGGCCAAGAGAAAGGCCAGTGGCATACTT 819 43.59 EKMSMTISEQKAAAKELRMLTKRMPSFRALFGESLDAISSLLSPLCGDNSQSSIHTDLQEDVITTLLNLSIHDNNKKLVAETPKVIPLLMEALRSGTMETRSNAAAALFTLSALDSNKALIGKSGALEPLIDLLDEGHPLAIKDAASAIFNLCIIHENKARAVRDGAVRVLLKKIMKQMHVDELLAILAMLSNHPKAIEEMGELGAVPFLLRIIRESPCSRNKENCIVIIHAICLYDRTKWKDIREEEKSYRTISELAQNGTSRAKRKASGIL 273
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 24662611 24663429 + MC06g1727 Mch6g2246 691693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g2246 273 Gene3D - 6 273 IPR011989 -
Mch6g2246 273 SMART arm_5 194 235 IPR000225 GO:0005515(InterPro)
Mch6g2246 273 SMART arm_5 72 113 IPR000225 GO:0005515(InterPro)
Mch6g2246 273 SMART arm_5 114 154 IPR000225 GO:0005515(InterPro)
Mch6g2246 273 Pfam Armadillo/beta-catenin-like repeat 116 153 IPR000225 GO:0005515(InterPro)
Mch6g2246 273 PANTHER U BOX DOMAIN-CONTAINING 2 273 - -
Mch6g2246 273 SUPERFAMILY ARM repeat 10 273 IPR016024 -
Mch6g2246 273 FunFam RING-type E3 ubiquitin transferase 1 273 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g2246 Mch-Chr6:24662611 Mch8g2514 Mch-Chr8:28053453 1.14E-66 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g2246 K27971 - csv:101215688 475.707