Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g2268 ATGGGCGGTGGCGGGGGCACGGTATACACTTTGGCTGAGGTTGCCTCCCACGACAGTCGCAACGACTGCTGGCTGATCATTGAGAACAAGGTCTATGATGTAACAAAATTCCTAGAAGACCATCCTGGTGGTGATGAAGTCTTGTTGTCAGCCATCGGTAAGGATGCAACAAATGATTTTGACGATGTTGGGCACAGTAGCGCTGCTAGAGCAATGATGGATGAGTTTTACGTAGGTGATATCGATAGCTCGACTATTCCCGCAAAAAGAAAGTACACTCCTCCAAAGCAGCCCCTATACAACCAAGACAAGACACCAGAATTCATTATCAAGGTCCTCCAGTTTCTAGCTCCCATGGTAATCTTGGGTTTGGCTTTTGGCGTCCACCTTTATACCAAAACGACTTAA 408 47.06 MGGGGGTVYTLAEVASHDSRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPPKQPLYNQDKTPEFIIKVLQFLAPMVILGLAFGVHLYTKTT 135
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 24772305 24777219 + MC06g1745 Mch6g2268 691715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g2268 135 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 37 44 IPR018506 GO:0020037(InterPro)
Mch6g2268 135 PRINTS Cytochrome B5 signature 41 55 IPR001199 -
Mch6g2268 135 PRINTS Cytochrome B5 signature 69 81 IPR001199 -
Mch6g2268 135 PRINTS Cytochrome B5 signature 31 41 IPR001199 -
Mch6g2268 135 PRINTS Cytochrome B5 signature 56 63 IPR001199 -
Mch6g2268 135 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 7 92 IPR036400 -
Mch6g2268 135 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 6 82 IPR001199 -
Mch6g2268 135 FunFam Cytochrome b5 type B 5 86 - -
Mch6g2268 135 Pfam Cytochrome b5-like Heme/Steroid binding domain 10 81 IPR001199 -
Mch6g2268 135 SMART Cyt_b5_2 9 82 IPR001199 -
Mch6g2268 135 Gene3D - 6 85 IPR036400 -
Mch6g2268 135 PANTHER CYTOCHROME B5 7 129 IPR050668 GO:0005783(PANTHER)|GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g2268 Mch-Chr6:24772305 Mch8g0144 Mch-Chr8:897967 5.28E-32 dispersed
Mch8g3179 Mch-Chr8:33995153 Mch6g2268 Mch-Chr6:24772305 1.93E-15 transposed
Mch5g0194 Mch-Chr5:1248593 Mch6g2268 Mch-Chr6:24772305 2.20E-67 wgd
Mch6g2268 Mch-Chr6:24772305 Mch7g0872 Mch-Chr7:13249802 3.42E-63 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g2268 K23490 - csv:101212882 248.44