Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g2305 ATGCCTTTCTCGAATATTCTGCATCTTCTTCTGGTTCTTCTTCATGTGGTCAATTTGCTTTCCTTTTGCTCAGGACAATCTTCACCACACATATACTTATCTCCTTCCATACAGCCAAATCTGCAAACGACAATGACAGAAAGCTCAACAGAAAATGGAAGGTCAGAGTTAACGGGTTTTTCATTTGCATCTTCAAAATTACCTGGTAACTGGATATATAGGTCTTCTTTGGGACCATCCACTGCTCCTGCACCATCTCCAGTAGGTCCTAGGAATGCACCTTTACCAATTCGACACCGTCGACGGCATCGTATACGACCTCATGTGGTTGCACCTACCCCATCAAAAGACCAAGGTTGTGATCAAATATGCATGGAACCCCTTACTGCGGCTCCCTTTGGTTCACCTTGTGGCTGTGTGTTTCCCATGAAAGTCAGACTTCTTCTGGATATAGCTCCATATGCTGTTTTTCCTGTGATGAATGATCTCGAAATTGAGATTGCAGAGGGTACTTATTTGGAGCAGAGCCAAGTGAAAATCATGGGTGCAAGTGCAGATAGTCAAAATCAAGGAAGAACTATGGTGGACATAAACTTAGTACCTTTGGGAGAGAAGTTTGATAATACCACTGCAGTATTGACTTACAGAAGGTTTTGGGATAAAAAGGTGCATCTAAACATGACACTTTTTGGTGATTATGAAGTTGTCTACATCAGCTATCCAGGGATTCCTTCTTCACCCCCATATGGAGGATACATGGGAAGTGCTCCTAGTGGAAGTGCTGGAGATCTTCCCATCACTGCAAATTTCGTTAATAAAAGCCAGAGGATGAATGTCAAAACGATTGCAATCATAGCACTTTCAGCATTTGTTGTGTTATTAGTGTTCATTGGAGCTCTTTCCATCTTGGTAAAATGGAGAAAGGTCGGAAGACCGTCTAGTGCTGTTGGCCCTGTCTTCACATCATCTATTAACAAAAGATCTGGAATAGGATCAACTTTATCAAGTAGCATTGCAAGCTCCACCTCTGTTTCCATAATTTCCACAATGCCAACCAGTATTCAATCTGTTAAAACGTTTGCACTTTCAGAACTTGAGAAAGCAACAGAAAAGTTTAGTTCAAAAAGGGTCTTAGGCGAAGGGGGATTCGGCCGAGTTTTCTGTGGAATTTTGGAAGATGGAAATGAAGTTGCAGTTAAGTTGCTTACAAGGGATAATCAGAATAGGGACCGGGAATTTATTGCAGAAGTTGAGATGTTGAGTAGACTGCATCATCGCAACCTTGTGAAACTGATTGGGATATGCATTGAAGGTCGAACTCGCTGCTTAGTATACGAGCTTGTCCATAATGGCAGTGTTGAGTCCCACTTGCATGGCATTGACAAGAGAAAAGGACCTCTCGACTGGGACGCACGGTTAAAAATTGCTCTTGGAGCAGCAAGAGGTTTGGCATATCTTCATGAAGATTCTAATCCTCGTGTCATCCACCGCGATTTCAAGGCAAGTAATGTTCTATTGGAAGTTGACTTCACCCCCAAGGTTTCGGATTTTGGATTGGCTAGGGAAGCAACTGAAGGAAGTGAACATATATCGACACGGGTCATGGGAACTTTCGGGTACGTTGCACCTGAGTATGCAATGACTGGGCACCTGCTCGTCAAAAGTGATGTTTATAGTTATGGAGTTGTGCTACTTGAGCTTCTTTCGGGAAGAAAACCGGTCGACATGTCCCAACCACATGGCGAGGAGAACCTCGTTACTTGGGCTCGGCCTCTGCTGACCAGTAAAGAAGGTTTGGAGCAACTAGTAGATCCTTCTATAGCAGGTAGTTATGACTTTGATGACATGGCCAAGGTGGCTGCCATTGCTTCTATGTGTGTTCATCCGGAGGTGACCCAGAGGCCATTTATGGGAGAAGTCGTGCAAGCTCTAAAGCTAATATACAACGACACAGACGAGACATGTGCAGACTGCTGCAGTCTAAAGGAGTCCTCTGCTCGAGACTCGGATTTCAAAGGCGATCTTGTGCCATCAGATAGCAGTTGGTGGAACGCGGGTGGCTTTACTCCTCGGTTGACATTCGGGCAAGCCTCTTCCTTCATCACCATGGAATACAGCTCTGGCCCTCTTGAAGAGATGGAAAACAGACCGTTTTCAACTTCAAGTTTGGTTGGGGATGAAATATCATTGCCTATTCGGCATGGAAACAGGTCCGGTCCCTTGCGAACCGCCCGAAGCAAGCCTGCCTTCTATAGATTTTCGGGAAGCAGGAGCGAGCATGGGGGACTTCTTTCAAGGCCTTCTTGGAACAACGGGTTTTGGGTTTGA 2328 44.85 MPFSNILHLLLVLLHVVNLLSFCSGQSSPHIYLSPSIQPNLQTTMTESSTENGRSELTGFSFASSKLPGNWIYRSSLGPSTAPAPSPVGPRNAPLPIRHRRRHRIRPHVVAPTPSKDQGCDQICMEPLTAAPFGSPCGCVFPMKVRLLLDIAPYAVFPVMNDLEIEIAEGTYLEQSQVKIMGASADSQNQGRTMVDINLVPLGEKFDNTTAVLTYRRFWDKKVHLNMTLFGDYEVVYISYPGIPSSPPYGGYMGSAPSGSAGDLPITANFVNKSQRMNVKTIAIIALSAFVVLLVFIGALSILVKWRKVGRPSSAVGPVFTSSINKRSGIGSTLSSSIASSTSVSIISTMPTSIQSVKTFALSELEKATEKFSSKRVLGEGGFGRVFCGILEDGNEVAVKLLTRDNQNRDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGIDKRKGPLDWDARLKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEVDFTPKVSDFGLAREATEGSEHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLSGRKPVDMSQPHGEENLVTWARPLLTSKEGLEQLVDPSIAGSYDFDDMAKVAAIASMCVHPEVTQRPFMGEVVQALKLIYNDTDETCADCCSLKESSARDSDFKGDLVPSDSSWWNAGGFTPRLTFGQASSFITMEYSSGPLEEMENRPFSTSSLVGDEISLPIRHGNRSGPLRTARSKPAFYRFSGSRSEHGGLLSRPSWNNGFWV 775
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 25035360 25041768 - MC06g1775 Mch6g2305 691752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g2305 775 ProSiteProfiles Protein kinase domain profile. 372 647 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g2305 775 FunFam receptor-like serine/threonine-protein kinase ALE2 345 447 - -
Mch6g2305 775 ProSitePatterns Protein kinases ATP-binding region signature. 378 400 IPR017441 GO:0005524(InterPro)
Mch6g2305 775 CDD STKc_IRAK 378 647 - -
Mch6g2305 775 FunFam Receptor-like serine/threonine-protein kinase ALE2 448 663 - -
Mch6g2305 775 SUPERFAMILY Protein kinase-like (PK-like) 350 647 IPR011009 -
Mch6g2305 775 Pfam Protein tyrosine and serine/threonine kinase 375 644 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch6g2305 775 PANTHER OS01G0750732 PROTEIN 122 668 IPR050885 -
Mch6g2305 775 ProSitePatterns Serine/Threonine protein kinases active-site signature. 494 506 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch6g2305 775 Gene3D Transferase(Phosphotransferase) domain 1 448 666 - -
Mch6g2305 775 Gene3D Phosphorylase Kinase; domain 1 344 447 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g1804 Mch-Chr4:20968388 Mch6g2305 Mch-Chr6:25035360 7.15E-74 dispersed
Mch6g2077 Mch-Chr6:23048029 Mch6g2305 Mch-Chr6:25035360 2.64E-97 dispersed
Mch6g2305 Mch-Chr6:25035360 Mch9g0252 Mch-Chr9:1887559 1.89E-197 dispersed
Mch6g2305 Mch-Chr6:25035360 Mch6g0923 Mch-Chr6:6498503 7.77E-213 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77515 PF07714 PK_Tyr_Ser-Thr 2.00E-46 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g2305 - - - 0.0