Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch6g2305 | ATGCCTTTCTCGAATATTCTGCATCTTCTTCTGGTTCTTCTTCATGTGGTCAATTTGCTTTCCTTTTGCTCAGGACAATCTTCACCACACATATACTTATCTCCTTCCATACAGCCAAATCTGCAAACGACAATGACAGAAAGCTCAACAGAAAATGGAAGGTCAGAGTTAACGGGTTTTTCATTTGCATCTTCAAAATTACCTGGTAACTGGATATATAGGTCTTCTTTGGGACCATCCACTGCTCCTGCACCATCTCCAGTAGGTCCTAGGAATGCACCTTTACCAATTCGACACCGTCGACGGCATCGTATACGACCTCATGTGGTTGCACCTACCCCATCAAAAGACCAAGGTTGTGATCAAATATGCATGGAACCCCTTACTGCGGCTCCCTTTGGTTCACCTTGTGGCTGTGTGTTTCCCATGAAAGTCAGACTTCTTCTGGATATAGCTCCATATGCTGTTTTTCCTGTGATGAATGATCTCGAAATTGAGATTGCAGAGGGTACTTATTTGGAGCAGAGCCAAGTGAAAATCATGGGTGCAAGTGCAGATAGTCAAAATCAAGGAAGAACTATGGTGGACATAAACTTAGTACCTTTGGGAGAGAAGTTTGATAATACCACTGCAGTATTGACTTACAGAAGGTTTTGGGATAAAAAGGTGCATCTAAACATGACACTTTTTGGTGATTATGAAGTTGTCTACATCAGCTATCCAGGGATTCCTTCTTCACCCCCATATGGAGGATACATGGGAAGTGCTCCTAGTGGAAGTGCTGGAGATCTTCCCATCACTGCAAATTTCGTTAATAAAAGCCAGAGGATGAATGTCAAAACGATTGCAATCATAGCACTTTCAGCATTTGTTGTGTTATTAGTGTTCATTGGAGCTCTTTCCATCTTGGTAAAATGGAGAAAGGTCGGAAGACCGTCTAGTGCTGTTGGCCCTGTCTTCACATCATCTATTAACAAAAGATCTGGAATAGGATCAACTTTATCAAGTAGCATTGCAAGCTCCACCTCTGTTTCCATAATTTCCACAATGCCAACCAGTATTCAATCTGTTAAAACGTTTGCACTTTCAGAACTTGAGAAAGCAACAGAAAAGTTTAGTTCAAAAAGGGTCTTAGGCGAAGGGGGATTCGGCCGAGTTTTCTGTGGAATTTTGGAAGATGGAAATGAAGTTGCAGTTAAGTTGCTTACAAGGGATAATCAGAATAGGGACCGGGAATTTATTGCAGAAGTTGAGATGTTGAGTAGACTGCATCATCGCAACCTTGTGAAACTGATTGGGATATGCATTGAAGGTCGAACTCGCTGCTTAGTATACGAGCTTGTCCATAATGGCAGTGTTGAGTCCCACTTGCATGGCATTGACAAGAGAAAAGGACCTCTCGACTGGGACGCACGGTTAAAAATTGCTCTTGGAGCAGCAAGAGGTTTGGCATATCTTCATGAAGATTCTAATCCTCGTGTCATCCACCGCGATTTCAAGGCAAGTAATGTTCTATTGGAAGTTGACTTCACCCCCAAGGTTTCGGATTTTGGATTGGCTAGGGAAGCAACTGAAGGAAGTGAACATATATCGACACGGGTCATGGGAACTTTCGGGTACGTTGCACCTGAGTATGCAATGACTGGGCACCTGCTCGTCAAAAGTGATGTTTATAGTTATGGAGTTGTGCTACTTGAGCTTCTTTCGGGAAGAAAACCGGTCGACATGTCCCAACCACATGGCGAGGAGAACCTCGTTACTTGGGCTCGGCCTCTGCTGACCAGTAAAGAAGGTTTGGAGCAACTAGTAGATCCTTCTATAGCAGGTAGTTATGACTTTGATGACATGGCCAAGGTGGCTGCCATTGCTTCTATGTGTGTTCATCCGGAGGTGACCCAGAGGCCATTTATGGGAGAAGTCGTGCAAGCTCTAAAGCTAATATACAACGACACAGACGAGACATGTGCAGACTGCTGCAGTCTAAAGGAGTCCTCTGCTCGAGACTCGGATTTCAAAGGCGATCTTGTGCCATCAGATAGCAGTTGGTGGAACGCGGGTGGCTTTACTCCTCGGTTGACATTCGGGCAAGCCTCTTCCTTCATCACCATGGAATACAGCTCTGGCCCTCTTGAAGAGATGGAAAACAGACCGTTTTCAACTTCAAGTTTGGTTGGGGATGAAATATCATTGCCTATTCGGCATGGAAACAGGTCCGGTCCCTTGCGAACCGCCCGAAGCAAGCCTGCCTTCTATAGATTTTCGGGAAGCAGGAGCGAGCATGGGGGACTTCTTTCAAGGCCTTCTTGGAACAACGGGTTTTGGGTTTGA | 2328 | 44.85 | MPFSNILHLLLVLLHVVNLLSFCSGQSSPHIYLSPSIQPNLQTTMTESSTENGRSELTGFSFASSKLPGNWIYRSSLGPSTAPAPSPVGPRNAPLPIRHRRRHRIRPHVVAPTPSKDQGCDQICMEPLTAAPFGSPCGCVFPMKVRLLLDIAPYAVFPVMNDLEIEIAEGTYLEQSQVKIMGASADSQNQGRTMVDINLVPLGEKFDNTTAVLTYRRFWDKKVHLNMTLFGDYEVVYISYPGIPSSPPYGGYMGSAPSGSAGDLPITANFVNKSQRMNVKTIAIIALSAFVVLLVFIGALSILVKWRKVGRPSSAVGPVFTSSINKRSGIGSTLSSSIASSTSVSIISTMPTSIQSVKTFALSELEKATEKFSSKRVLGEGGFGRVFCGILEDGNEVAVKLLTRDNQNRDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGIDKRKGPLDWDARLKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEVDFTPKVSDFGLAREATEGSEHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLSGRKPVDMSQPHGEENLVTWARPLLTSKEGLEQLVDPSIAGSYDFDDMAKVAAIASMCVHPEVTQRPFMGEVVQALKLIYNDTDETCADCCSLKESSARDSDFKGDLVPSDSSWWNAGGFTPRLTFGQASSFITMEYSSGPLEEMENRPFSTSSLVGDEISLPIRHGNRSGPLRTARSKPAFYRFSGSRSEHGGLLSRPSWNNGFWV | 775 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 25035360 | 25041768 | - | MC06g1775 | Mch6g2305 | 691752 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch6g2305 | 775 | ProSiteProfiles | Protein kinase domain profile. | 372 | 647 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch6g2305 | 775 | FunFam | receptor-like serine/threonine-protein kinase ALE2 | 345 | 447 | - | - | |
Mch6g2305 | 775 | ProSitePatterns | Protein kinases ATP-binding region signature. | 378 | 400 | IPR017441 | GO:0005524(InterPro) | |
Mch6g2305 | 775 | CDD | STKc_IRAK | 378 | 647 | - | - | |
Mch6g2305 | 775 | FunFam | Receptor-like serine/threonine-protein kinase ALE2 | 448 | 663 | - | - | |
Mch6g2305 | 775 | SUPERFAMILY | Protein kinase-like (PK-like) | 350 | 647 | IPR011009 | - | |
Mch6g2305 | 775 | Pfam | Protein tyrosine and serine/threonine kinase | 375 | 644 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch6g2305 | 775 | PANTHER | OS01G0750732 PROTEIN | 122 | 668 | IPR050885 | - | |
Mch6g2305 | 775 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 494 | 506 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch6g2305 | 775 | Gene3D | Transferase(Phosphotransferase) domain 1 | 448 | 666 | - | - | |
Mch6g2305 | 775 | Gene3D | Phosphorylase Kinase; domain 1 | 344 | 447 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch4g1804 | Mch-Chr4:20968388 | Mch6g2305 | Mch-Chr6:25035360 | 7.15E-74 | dispersed | |
Mch6g2077 | Mch-Chr6:23048029 | Mch6g2305 | Mch-Chr6:25035360 | 2.64E-97 | dispersed | |
Mch6g2305 | Mch-Chr6:25035360 | Mch9g0252 | Mch-Chr9:1887559 | 1.89E-197 | dispersed | |
Mch6g2305 | Mch-Chr6:25035360 | Mch6g0923 | Mch-Chr6:6498503 | 7.77E-213 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77515 | PF07714 | PK_Tyr_Ser-Thr | 2.00E-46 | CL0016 | Mch | PK |
Pathway information
