Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g2372 ATGGAAGTGCAAAGTCACGATCACGGTCACATAATTGAAGTATGTGGGGATGTGCAAGCTGTAGGGCCGAGCATCACTGGAAGTAAAATTTGTGGGGATGCACCGTGTGGATTCTCAGATGCGAAAAATAGTTCGAAAGATGCGAAGGAGCGGTCAGCGTCCATGCGGAAGCTTTTTATAGCAGTTGTTCTCTGCATTGTTTTCATGAGTGTAGAAGTAGTTGGAGGTATTAAGGCAAACAGTCTTGCTATATTGACTGATGCTGCTCATTTGTTGTCAGATGTTGCTGCTTTTGCCATTTCTTTGTTCTCACTCTGGGCATCGGGCTGGGAGGCAACTCCACGCCAGTCGTATGGTTTCTTCCGAATTGAAATACTCGGTGCCCTCGTTTCCATTCAGATGATATGGCTTCTTGCTGGAATTCTTGTTTACGAAGCTATCATCCGACTTATCAATGGTCCTGGAGAAGTCAAGGGGTTGCTCATGTTTGTTGTTTCTGCCTTCGGGTTAGTTGTTAACATAGCTATGGCTCTGCTGCTTGGTCATGAACATGGCCATGCTCACTCTCATGGTCACAGTCATGGACATGGTGGGCACGACCATGAGCATGGTCATGGCAGCCACGAGCATGGTCATGGCAGCCACGAGCATGGTCACGAAGATCATACCAACAGGCATCACCACGGGATAAGTGTTACCACGCATCACCATCATCACCACGAAGAAGAGGGAGCTACCAGTAACGCTGCTAAGCACGATCATGTTCACACCCACGAGGTAGACACAACTGCACCCTTGCTTGAGAGTTACTACAAAGATGAAAGTCATTCCCAAAAGGGTACCGAGAAGCCAAAGAAACAACGAAACATAAACGTACAAGGTGCTTATCTTCACGTACTTGGAGACTCCATTCAAAGCATCGGAGTGATGATCGGCGGGGCAATCATATGGTACAATCCCAAATACAAGATCCTGGATCTGATATGCACTCTCATTTTCTCTGCAATTGTGCTCTGCACAACAATCCAAATGCTGCGGAACATCCTAGAGGTTCTGATGGAGAGCACGCCTCGAGAGATCGATGCGACAAAGCTCGAGAAGGGTCTGTGCGAGATGGACGAGGTAGTTGCAATCCACGAATTGCACATCTGGGCCATAACTGTGGGGAAGGTTCTATTGGCATGCCATGTTATAGTAAAGCCAGAGGCAAATGCAGACATGGTACTGGACAAGGTCATAGATTACATCAAGAGAGAATACAACATCAGTCATGTCACAATTCAGATAGAGCGCCAAAGATCTTAG 1305 47.05 MEVQSHDHGHIIEVCGDVQAVGPSITGSKICGDAPCGFSDAKNSSKDAKERSASMRKLFIAVVLCIVFMSVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWASGWEATPRQSYGFFRIEILGALVSIQMIWLLAGILVYEAIIRLINGPGEVKGLLMFVVSAFGLVVNIAMALLLGHEHGHAHSHGHSHGHGGHDHEHGHGSHEHGHGSHEHGHEDHTNRHHHGISVTTHHHHHHEEEGATSNAAKHDHVHTHEVDTTAPLLESYYKDESHSQKGTEKPKKQRNINVQGAYLHVLGDSIQSIGVMIGGAIIWYNPKYKILDLICTLIFSAIVLCTTIQMLRNILEVLMESTPREIDATKLEKGLCEMDEVVAIHELHIWAITVGKVLLACHVIVKPEANADMVLDKVIDYIKREYNISHVTIQIERQRS 434
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 25595776 25597535 + MC06g1829 Mch6g2372 691819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g2372 434 SUPERFAMILY Cation efflux protein transmembrane domain-like 52 354 IPR027469 -
Mch6g2372 434 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 27 432 IPR050681 GO:0005385(PANTHER)|GO:0005773(PANTHER)|GO:0005886(PANTHER)|GO:0071577(PANTHER)
Mch6g2372 434 MobiDBLite consensus disorder prediction 235 259 - -
Mch6g2372 434 Pfam Cation efflux family 58 353 IPR002524 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch6g2372 434 MobiDBLite consensus disorder prediction 195 228 - -
Mch6g2372 434 NCBIfam cation diffusion facilitator family transporter 55 433 IPR002524 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch6g2372 434 Gene3D Cation efflux protein transmembrane domain 54 352 IPR027469 -
Mch6g2372 434 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 359 430 IPR036837 -
Mch6g2372 434 MobiDBLite consensus disorder prediction 185 259 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g0193 Mch-Chr3:2416673 Mch6g2372 Mch-Chr6:25595776 4.66E-86 dispersed
Mch6g2372 Mch-Chr6:25595776 Mch8g1576 Mch-Chr8:12636739 1.17E-11 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g2372 K14689 - csv:101213602 637.106