Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g2385 ATGAGCTCCCACACTTCCGCCGAAGACTGTCTCGGTTGGGCTGCAACAGATTCGTCTGGGTTTCTATCTCCTTACAAATTCAGCCGCAGGGTTCTTGGAGATTATGATGTCTCAATTACAATAACGCATTGCGGAATTTGTTATGCAGATGTAATATGGACAAGAAATAAACATGCAGATTCAAAGTATCCTTTGGTGCCTGGGCATGAGATTGCAGGAATTGTGAAAAATGTTGGCTCAAGTGTTCACCGATTCAAAGTTGGAGATCATGTTGGGGTAGGAACCTACGTGAATTCTTGCAGACAATGTGAGTATTGCGAAGATGGTCAAGAAGTTAGTTGCACAAGTGGATCCATTTATACTTTTAATGCAATTGACGTTGATGGTACAATTACAAAGGGAGGATATTCCAACTACATAGTTGTCCATGAGAGGCAATACTGCTATAGAATACCCGACAATTATCCATTAGCTTCAGCTGCTCCTTTGCTTTGTGCTGGAATTACTGTTTATGCTCCGATGATTCGGCATAAGATGAATCAACCTGGTAAATCTCTTGGTGTGATTGGACTTGGCGGTCTCGGCCACATGGCAGTGAAGTTTGGGAAGGCTTTTGGACTGAATGTGACGGTTTTTAGCACTAGCATATCCAAGAAAGAACATGCCCTGCGTCTTCTTAAAGCAGACAAATTCGTTATCTCATCCGACAAAGAGCAAATGGAGGCCTTGTCTAAGTCCCTCGACTTTATTATCGATACTGCCTCTGGTGATCACCCATTTGATCCATACATGTCTACGTTGAAGATTGGTGGCGTTATGGTTTTGGTCGGGTTTCCTTCTGAAGTCAAGTTCAGTCCTGCAAGCCTGAATTTGGGTTTGAGAACCATTTCTGGTAGCATAACTGGTGGCACTAAAGTGACCCAAGAAATGATAGATTTCTGTGCTGCTAACGGTATCTATCCCAACATAGAAGTGATTCCAATTCAGTACTCAAATGAAGCTATCGAAAGGGTAATAAAGAATGATGTCCAGTATCGATTTGTAATTGATATCCAAGGCTCCCTGAAATGA 1071 42.3 MSSHTSAEDCLGWAATDSSGFLSPYKFSRRVLGDYDVSITITHCGICYADVIWTRNKHADSKYPLVPGHEIAGIVKNVGSSVHRFKVGDHVGVGTYVNSCRQCEYCEDGQEVSCTSGSIYTFNAIDVDGTITKGGYSNYIVVHERQYCYRIPDNYPLASAAPLLCAGITVYAPMIRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVFSTSISKKEHALRLLKADKFVISSDKEQMEALSKSLDFIIDTASGDHPFDPYMSTLKIGGVMVLVGFPSEVKFSPASLNLGLRTISGSITGGTKVTQEMIDFCAANGIYPNIEVIPIQYSNEAIERVIKNDVQYRFVIDIQGSLK 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 25729871 25739578 - MC06g1841 Mch6g2385 691832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g2385 356 FunFam Putative cinnamyl alcohol dehydrogenase 6 322 351 - -
Mch6g2385 356 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 319 IPR036291 -
Mch6g2385 356 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 186 213 IPR029752 -
Mch6g2385 356 Pfam Alcohol dehydrogenase GroES-like domain 34 153 IPR013154 -
Mch6g2385 356 FunFam Cinnamyl alcohol dehydrogenase 166 321 - -
Mch6g2385 356 CDD CAD1 12 350 IPR047109 GO:0016616(InterPro)
Mch6g2385 356 SUPERFAMILY GroES-like 17 184 IPR011032 -
Mch6g2385 356 Pfam Zinc-binding dehydrogenase 193 315 IPR013149 -
Mch6g2385 356 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270(InterPro)|GO:0016491(InterPro)
Mch6g2385 356 Gene3D - 166 321 - -
Mch6g2385 356 Gene3D - 13 351 - -
Mch6g2385 356 SMART PKS_ER_names_mod 14 349 IPR020843 GO:0016491(InterPro)
Mch6g2385 356 PANTHER ALDEHYDE REDUCTASE 4 352 IPR047109 GO:0016616(InterPro)|GO:0016616(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g0736 Mch-Chr4:4997541 Mch6g2385 Mch-Chr6:25729871 6.16E-93 dispersed
Mch6g2385 Mch-Chr6:25729871 Mch10g0473 Mch-Chr10:3081271 3.10E-102 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g2385 K00083 - csv:101211438 640.573