Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch6g2401 | GCGGCGCTGCTCTCTGCCCTGCTCGCCTACTTCTTTTGGTTCCTCAATGTAAAGAGGTCCTTGACCGGGCCACGTGTCTGGCCGCTACTGGGCAGTCTCCCGGGTCTCTTCAAGAACGGTCACCGAATGCATGACTGGATCGCGGACAATCTCCGCTCGGCGGGCGGCACGTACCAGACTTGCACGTGCGCCGTCCCCTTCTTAGCCAGGAAGCTTTGTCACGTGACCGTCACGTGCGACCCGAAGAACTTGGAGCATGTTCTCAAGACCCGGTTCGAGAATTACCCCAAAGGCCCCAATTGGCAGGCCGTGTTCCACGATCTGCTCGGTGACGGAATCTTCAACTCCGATGGCGACACGTGGCTCTTCCAGCGTAAGACTGCCGCGCTGGAATTCACCACCAGGACTCTCCGCCAAGCCATGGCTCGTTGGGTCAGCCGAGCCATCGAGTCCCGGTTTTGCCCGATTCTCGATTCGGCCCAGCGTCGAGCTGAGTCGGTCGATCTCCAAGACCTCTTGCTTCGGCTTACGTTCGACAACATTTGCGGGTTGACATTCGGTAAGGACCCGCAAACTCTGGCTCCTGAATTGCCCGACAATGACTTTGCTCGGGCGTTCGATCGAGCCACCGAAGCCACGTTGTCCCGGTTTATTTTGCCCAAATTTATATGGAAGATGAAGAAATGGCTCCGGCTCGGGATGGAGGTGACATTGAGCCACAGCCTCCAGCACACGGATCAATACTTAACCAACATCATCAAGACACGTAAGCTCGAACTATCCAGTCAGCACCAAGATGGAAGTGGGACCCCACACGCACACGACGACTTGCTGTCGAGATTCATGAAGAAGAAGGAATCCTACTCAGACGCGTTCCTCCAACACGTGGCACTCAACTTCATCCTAGCTGGACGGGACACGTCATCCGTGGCGCTGAGCTGGTTCTTCTACCTGGTCACCCAAAACCCAAGAGTTGAAGAGAAAATTCTCGCCGAAATCTGCACCGTCCTGATGGAGACACGTGGCAGCAAGATATCCACGTGGGTCAACGAGCCACTGGGATTTGAAGAAATCGACCGATTAATTTACCTGAAAGCCGCCCTGTCGGAAACCCTCCGGCTGTACCCGTCGGTGCCGGAAGATTCCAAACACGTGGTAAACGACGACGTTTTGCCCACCGGAGCTTTCGTTCCGGCGGGTTCATCGATTACATATTCTATATACTCCATCGGGCGGATGAAATTCATTTGGGGAGAAGATTGCTTAGAATTCAAGCCGGAGAGATGGTTGGATTCGAATGGCAAAAAATTCGAGCTTCAAGATGCTTATAAATTTGCCGCCTTTAACGCTGGCCCGAGGATATGTTTGGGAAAAGATTTGGCTTACTTGCAAATGAAGTCCATTGCGGCGGCGGTGTTGCTCCGGCACCGGCTGACGGTAGCGGCCGGCCACCGTGTGGAGCAGAAGATGTCGTTGACGTTGTTCATGAAATATGGACTCAAGGTTTATTTGCATCCGAGAGAATTGAGCCATGTAGTGGAGAAGATCAGCAAGACGGCGGCGGAGACGGCGGCAGTGTCG | 1581 | 54.33 | AALLSALLAYFFWFLNVKRSLTGPRVWPLLGSLPGLFKNGHRMHDWIADNLRSAGGTYQTCTCAVPFLARKLCHVTVTCDPKNLEHVLKTRFENYPKGPNWQAVFHDLLGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIESRFCPILDSAQRRAESVDLQDLLLRLTFDNICGLTFGKDPQTLAPELPDNDFARAFDRATEATLSRFILPKFIWKMKKWLRLGMEVTLSHSLQHTDQYLTNIIKTRKLELSSQHQDGSGTPHAHDDLLSRFMKKKESYSDAFLQHVALNFILAGRDTSSVALSWFFYLVTQNPRVEEKILAEICTVLMETRGSKISTWVNEPLGFEEIDRLIYLKAALSETLRLYPSVPEDSKHVVNDDVLPTGAFVPAGSSITYSIYSIGRMKFIWGEDCLEFKPERWLDSNGKKFELQDAYKFAAFNAGPRICLGKDLAYLQMKSIAAAVLLRHRLTVAAGHRVEQKMSLTLFMKYGLKVYLHPRELSHVVEKISKTAAETAAVS | 527 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 25922154 | 25923734 | - | MC06g1856 | Mch6g2401 | 691848 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch6g2401 | 527 | Pfam | Cytochrome P450 | 23 | 494 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g2401 | 527 | PRINTS | E-class P450 group I signature | 312 | 338 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g2401 | 527 | PRINTS | E-class P450 group I signature | 365 | 383 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g2401 | 527 | PRINTS | E-class P450 group I signature | 292 | 309 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g2401 | 527 | PRINTS | E-class P450 group I signature | 455 | 478 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g2401 | 527 | PRINTS | E-class P450 group I signature | 445 | 455 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g2401 | 527 | CDD | CYP86A | 61 | 500 | - | - | |
| Mch6g2401 | 527 | Gene3D | Cytochrome P450 | 16 | 512 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g2401 | 527 | PRINTS | P450 superfamily signature | 455 | 466 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g2401 | 527 | PRINTS | P450 superfamily signature | 446 | 455 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g2401 | 527 | PRINTS | P450 superfamily signature | 366 | 377 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g2401 | 527 | PRINTS | P450 superfamily signature | 303 | 320 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g2401 | 527 | FunFam | Cytochrome P450 | 15 | 510 | - | - | |
| Mch6g2401 | 527 | SUPERFAMILY | Cytochrome P450 | 20 | 507 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g2401 | 527 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 448 | 457 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch6g2401 | 527 | PANTHER | CYTOCHROME P450 | 13 | 500 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch3g0122 | Mch-Chr3:1501818 | Mch6g2401 | Mch-Chr6:25922154 | 1.14E-238 | dispersed | |
| Mch6g2401 | Mch-Chr6:25922154 | Mch7g0666 | Mch-Chr7:11314451 | 5.46E-295 | dispersed | |
| Mch6g2401 | Mch-Chr6:25922154 | Mch6g0068 | Mch-Chr6:397319 | 2.36E-101 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch6g2401 | K15398 | - | csv:101216733 | 887.871 |