Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g2417 ATGGCGACGGGGATCTCGGGCGTGGCAACCGCCGCAGCGTACCGGTTCAACCCGGGGCTGTTTCCGGATGCTCCGAAAATCGTAGCGAAGAGGACCCCACGTGTCCCGCGGCGGTGCTCGAGGCAGAGGTGGAAGAGATTGTCGGCCGGCGGCGGAGGAGATGACGTTAATGAATTGGAAGTGGTGAATAAGGTTTCGAATGCGACTGTGGAGGAGAAATTGGCCAGGAAGAAATTGGAAAGAGAAACTTATCTTGTCGCTGCAATTGTATCGAGCTTCGGGATTACTTCAATGGCCGCCGTCGCCGTTTGTTACAGATTCTCATGTCAAATGGGGAACGGAGAGTTTCCAGTAGTTGAAATGTTGGGTACTTTCGCTCTTTCTATTGGCGCTGCGGTGGGAATGGAATTTTGGGCAAGGTGGGCTCATAGAGCGCTGTGGCATGCTTCATTATGGAATATGCACCAGTCTCATCACAGGCCTAGAAATGGAGCATTTGAACTAAACGACGTGTTTGTGATTATCAACGCTGTGCCTGCCATTGCTCTTATTTCCTTCGGCCTCTGCAATAAAGGCTTCATTCCAGGCCTCTGCTTTGGTGCCGGTTTGGGCATTACGGTCTTCGGTATGGCTTATATGTTCGTACACGACGGCCTCGTGCACCGTCGTTTCCCGGTGGGCCCCATAGCAGCTGTCCCCTATTTACGACGTGTCGCGGCTGCCCATCATATTCATCACACGGACAAATTCAACGGAGTCCCATACGGATTGTTTTTAGGACCCAAGGAATTAAAGGAAGTGGGTGGAGAGGAAGAGTTGCAGAAGGAAATTGAAAGGAGAAGCAAGGGTTACAAAAGTTAA 861 51.34 MATGISGVATAAAYRFNPGLFPDAPKIVAKRTPRVPRRCSRQRWKRLSAGGGGDDVNELEVVNKVSNATVEEKLARKKLERETYLVAAIVSSFGITSMAAVAVCYRFSCQMGNGEFPVVEMLGTFALSIGAAVGMEFWARWAHRALWHASLWNMHQSHHRPRNGAFELNDVFVIINAVPAIALISFGLCNKGFIPGLCFGAGLGITVFGMAYMFVHDGLVHRRFPVGPIAAVPYLRRVAAAHHIHHTDKFNGVPYGLFLGPKELKEVGGEEELQKEIERRSKGYKS 286
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 26087148 26090024 - MC06g1872 Mch6g2417 691864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g2417 286 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 57 284 IPR045019 GO:0009507(PANTHER)|GO:0010291(PANTHER)|GO:0016119(PANTHER)|GO:0016123(PANTHER)|GO:0016491(InterPro)
Mch6g2417 286 Pfam Fatty acid hydroxylase 131 258 IPR006694 GO:0005506(InterPro)|GO:0008610(InterPro)|GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0128 Mch-Chr10:755150 Mch6g2417 Mch-Chr6:26087148 6.25E-115 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g2417 K15746 - csv:101214325 354.755