Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g2418 ATGGCTACTAAAGAATCGAGCTCTGCCACTGCCGCAGAGGGGAAGATTAAAGGGGCTCTCACCCATGGCGGCCGATATGTGCAGTATAATGTGTACGGTAACTTGTTCGAGGTTTCGGCGAAGTATGTTCCTCCTTTGCGACCCATCGGTAGAGGTGCTTATGGCCTTGTCTGTGCTGCTGTGAATTCAGAAACACATGAGGAGGTTGCCATCAAGAAAATTGGAAATGCATTTGATAATATTATTGATGCGAAGAGGACGTTGAGGGAAATTAAGCTTCTTTGCCACATGGAACATGAGAATATTATTGCCATCCGAGACATCATACGACCACCAAAACGAGAGGTTTTTAACGATGTGTATATTGTTTATGAATTGATGGACACTGATCTTCATCAAATAATTCGTTCTGACCAATCACTGACAGATGATCATTGCCAGTACTTTTTGTATCAGTTATTGCGTGGGCTGAAATACGTGCATTCGGCAAAGGTGTTACACCGTGATCTCAAGCCAAGCAACCTGCTTCTGAATGCAAATTGCGACCTTAAAATTGGAGACTTCGGATTGGCAAGGACAACTTCTGAAACTGACTTCATGACTGAATATGTGGTTACTCGCTGGTACCGAGCCCCGGAATTGCTCCTCAATTGTTCGGAGTACACTGCTGCCATTGATGTTTGGTCTGTTGGATGCATACTTGGTGAGATAATGACCAGAGAACCTCTGTTCCCAGGAAAAGATTATGTTCATCAGCTCAGACTTATAACTGAGCTGCTAGGATCACCGGATGATGCCAGTCTAGGATTTCTCCGAAGCGACAACGCCCGGAGATACGTTAAGCAGCTGCCACAGTACAGGAAACAACAATTCTCCACTAGATTTACAAACATGTCCCCAGCTGCCCTGGATCTTCTAGAAAAGATGCTTGTTTTCGATCCCAACAAACGCATCACAGTTGAGGAGGCACTTTGCCATCCGTACTTGCAATCCCTTCACGACATCAACGATGAACCGGTCTGCGCCAGACCTTTCAATTTTGATTTCGAGCAACCGTCGTGCACTGAAGAGCATATTAAAGAACTCATCTGGAAAGAATCTGTGAGGTTCAATCCTGACGAATCAGCCAGGAGGACAACTCTTTGCGTTTGA 1152 45.14 MATKESSSATAAEGKIKGALTHGGRYVQYNVYGNLFEVSAKYVPPLRPIGRGAYGLVCAAVNSETHEEVAIKKIGNAFDNIIDAKRTLREIKLLCHMEHENIIAIRDIIRPPKREVFNDVYIVYELMDTDLHQIIRSDQSLTDDHCQYFLYQLLRGLKYVHSAKVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDVWSVGCILGEIMTREPLFPGKDYVHQLRLITELLGSPDDASLGFLRSDNARRYVKQLPQYRKQQFSTRFTNMSPAALDLLEKMLVFDPNKRITVEEALCHPYLQSLHDINDEPVCARPFNFDFEQPSCTEEHIKELIWKESVRFNPDESARRTTLCV 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 26093958 26099514 - MC06g1873 Mch6g2418 691865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g2418 383 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 36 365 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Mch6g2418 383 ProSitePatterns Protein kinases ATP-binding region signature. 49 73 IPR017441 GO:0005524(InterPro)
Mch6g2418 383 SUPERFAMILY Protein kinase-like (PK-like) 46 337 IPR011009 -
Mch6g2418 383 Gene3D Transferase(Phosphotransferase) domain 1 127 356 - -
Mch6g2418 383 SMART serkin_6 43 329 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g2418 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch6g2418 383 Gene3D Phosphorylase Kinase; domain 1 26 366 - -
Mch6g2418 383 ProSitePatterns MAP kinase signature. 78 181 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g2418 383 ProSiteProfiles Protein kinase domain profile. 43 329 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g2418 383 FunFam Mitogen-activated protein kinase 127 356 - -
Mch6g2418 383 Pfam Protein kinase domain 47 329 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g2418 383 CDD STKc_TEY_MAPK 36 372 - -
Mch6g2418 383 FunFam Mitogen-activated protein kinase 28 137 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g0431 Mch-Chr3:7742664 Mch6g2418 Mch-Chr6:26093958 2.75E-210 dispersed
Mch6g2418 Mch-Chr6:26093958 Mch7g0643 Mch-Chr7:11080539 4.64E-227 dispersed
Mch6g2418 Mch-Chr6:26093958 Mch8g0123 Mch-Chr8:720477 2.22E-201 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77518 PF00069 Pkinase 4.30E-71 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g2418 K20600 - csv:101214254 761.911