Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g2443 ATGCCTCCATGGTGGGGGAAGTCGGCGTCAAAAGAAGTAAAGAAGAGCAAGGAAAGTTTTATCGACACATTGCAGCGGAAACTTAGAACTTCTGATGGTAAAACAAACAGCAAATCAGGAGGGTCTCCAAGAAATTGCAACGACGCAGTTTCTGAGCAGGGATCTCGATCTCCTATCCTTTCAAGATCAGTTTCACCTTCCAAACAAGTTTCAAGATGTCAAAGCTTTTCTGAAAGGCCACAAGCACAACCTCTTCCACTTCCCGGTGTGCAGCTGCCAATTGTAGGTCGGACAGACTCTGGGATTAGTATTTCACCTAAACCAAGATCAGAAAGGGGCTCCAAGCCATCATCATTTCTACCACTCCCGAGGCCAGCATGCATTGGTAGGAGACCGAACCATGCAGATTTAGATGCAGATCTTGGTAATGGTTCAGTGTCCAGTGAGAGCTCTATTGATAGTACCGATCTATCCGATTCACGCCATCGTAGTCCACAGGCAACTGACTATGATCTTGGGACTAAAACTGCTGCAGGCAGTCCTTCCAGTGTCATTGCTAAGGATCAGTCTTCTACCGTCACCCAACCAAGTTCACGAGAGGCCGGAAAACCAGCAAATATCTCATTAAGCAACCACATTTTCTCCACATCACCCAAGCGGAGGCCTTTAAGCAGTCATGTTCCAAACTTGCAAGTTCCATATCATGGGAATTTATGCATCCCTCCAGACAGTTCCATGTCAAGTCCTTCTAGAAGTCCCATAAGGGCCTTTAGCGCAGAGCAAGTTATTAATAATGCTGCCAGTGCTGGAAAGCTCTATATGGATGTCACTTTTCCTGGATCAGGCCATTGCTCTAGTCCTGGTTCTGGTTACAATTCTGGGCATAATTCTATGGGTGGTGATTTGTCAGGGCAGTTATTTTTGCAACAAAGCCGGGGTAGTCCTGAATATTCTCCAGCACCTAGTCCCAGAATGACCAGCCCTGGCCCCAGCTCCAGAGTCCATAGTGGTGCAGTGACCCCAATTCATCCGAGGGCAGGAGGGATACCAACCGAGTCGCAAACAAGCTGGCCCGATGAGAAACAAACTCACCGCTTGCCTCTGCCTCCCGTTGCAATTTCCAATACTCCTTTTTCTCATTCCAATTCAGCTGCAACATCTCCTTCTGTTCCAAGAAGTCCTGGAAGGGCAGATAATCCAGCAAGTCCAGGCTCCCGTTGGAAAAAGGGGAAGCTTTTGGGTAGGGGTACTTTTGGGCATGTCTATGTTGGTTTTAACAGTGAAAGTGGTGAAATGTGTGCGATGAAGGAGGTTACGTTATTTTCAGATGATGCAAAGTCGAAGGAGAGTGCCAAGCAATTAATGCAGGAAATTACCTTGTTGAGTCGTTTACGGCATCCAAATATTGTCCAGTATTATGGATCTGAAACGGTCGGTGACAGGCTATACATATACCTTGAATACGTGTCTGGTGGCTCCATTTATAAACTTCTTCAGGAATATGGACAGCTTGGAGAATCAGCACTTCGTAGTTATACTCAGCAAATACTTTCCGGGCTTGCATATTTACATGCTAAAAGTACTGTTCACAGGGATATCAAAGGAGCAAATATACTTGTTGATCCCACTGGACGTGTTAAGTTGGCAGACTTTGGGATGGCAAAGCATATCACTGGGCAGTCTTGTCCTTTGTCTTTTAAAGGCAGCCCTTACTGGATGGCACCTGAGGTTATAAAAAACTCGAATGGTTGTAACCTCGCGGTGGATATTTGGAGTCTTGGATGCACGGTTTTGGAGATGGCAACGACAAAACCGCCTTGGAGTCAATATGAGGGGGTTGCTGCGATGTTTAAGATTGGCAACAGCAAGGAACTTCCTGAAATCCCAGATCACCTTCCACATGATGGAAAAGACTTTGTCAGACAATGTCTGCAACGGAATCCAGCTCATCGTCCTACAGCTGCTCAGCTTTTGGAGCACCCTTTTGTCAAACATGCTGCACCTCTTGAAAGACCGATTTTGGGTTCTGAACATTCGGATCCAACTCCAGGAATCACAAATGGAGTAAGAAATCTGGGTATTGAGCAAGGAAGGAATCTCAGCTTCTTGGATTCTGACAGATCTGCAGCTCATTCATCTAGACTCTCAACAGCTGCTTTTCATTCCAGTGAAATTCATATACCGAGGAACTTATCATGCCCCGTTTCACCCATTGGAAGCCCTCTGGTGCACTCTCGGTCACCACAACATCCCAGTGGAAGAATGTCACCGTCGCCCATCTCCAGCCCTCGGAACATGTCGGGCTCATCCACTCCTCTCACTGGAGGAAGCGGTGCCATTCCACACCAGCACCTCAAACAATCTCTATATTTACAGGAGGGTTTTGGGAGCTTGCCAAAGCCTTCGATAGGTCCCTATAGTAACGGTCCTTCCTATCACGATACGAACCTCGACATATTTCAGGGGATTCAGCCTGGCTCTCACATCTTCTCTGAGCTGGTGCACCATGAAACTGATTTTCTAGGAAAGCAGTTTGGAAAGCCTGCCTGGGAATTGTACGATGGGCAGGCAGTCTTAGCTGATCGCGTGTCGAGACAGCTGCTGAGTGATCATGTAACAACTCCGTCCCTGGATTTAAGTCCGAGCTCTCTATTGACCAACCGAAAATAG 2670 46.97 MPPWWGKSASKEVKKSKESFIDTLQRKLRTSDGKTNSKSGGSPRNCNDAVSEQGSRSPILSRSVSPSKQVSRCQSFSERPQAQPLPLPGVQLPIVGRTDSGISISPKPRSERGSKPSSFLPLPRPACIGRRPNHADLDADLGNGSVSSESSIDSTDLSDSRHRSPQATDYDLGTKTAAGSPSSVIAKDQSSTVTQPSSREAGKPANISLSNHIFSTSPKRRPLSSHVPNLQVPYHGNLCIPPDSSMSSPSRSPIRAFSAEQVINNAASAGKLYMDVTFPGSGHCSSPGSGYNSGHNSMGGDLSGQLFLQQSRGSPEYSPAPSPRMTSPGPSSRVHSGAVTPIHPRAGGIPTESQTSWPDEKQTHRLPLPPVAISNTPFSHSNSAATSPSVPRSPGRADNPASPGSRWKKGKLLGRGTFGHVYVGFNSESGEMCAMKEVTLFSDDAKSKESAKQLMQEITLLSRLRHPNIVQYYGSETVGDRLYIYLEYVSGGSIYKLLQEYGQLGESALRSYTQQILSGLAYLHAKSTVHRDIKGANILVDPTGRVKLADFGMAKHITGQSCPLSFKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPEIPDHLPHDGKDFVRQCLQRNPAHRPTAAQLLEHPFVKHAAPLERPILGSEHSDPTPGITNGVRNLGIEQGRNLSFLDSDRSAAHSSRLSTAAFHSSEIHIPRNLSCPVSPIGSPLVHSRSPQHPSGRMSPSPISSPRNMSGSSTPLTGGSGAIPHQHLKQSLYLQEGFGSLPKPSIGPYSNGPSYHDTNLDIFQGIQPGSHIFSELVHHETDFLGKQFGKPAWELYDGQAVLADRVSRQLLSDHVTTPSLDLSPSSLLTNRK 889
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 26371577 26378078 - MC06g1895 Mch6g2443 691890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g2443 889 Pfam Protein kinase domain 408 663 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g2443 889 MobiDBLite consensus disorder prediction 1 207 - -
Mch6g2443 889 MobiDBLite consensus disorder prediction 34 81 - -
Mch6g2443 889 MobiDBLite consensus disorder prediction 10 33 - -
Mch6g2443 889 SMART serkin_6 407 663 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g2443 889 MobiDBLite consensus disorder prediction 169 207 - -
Mch6g2443 889 ProSiteProfiles Protein kinase domain profile. 407 663 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g2443 889 MobiDBLite consensus disorder prediction 742 777 - -
Mch6g2443 889 MobiDBLite consensus disorder prediction 282 410 - -
Mch6g2443 889 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 51 669 IPR050538 -
Mch6g2443 889 MobiDBLite consensus disorder prediction 282 317 - -
Mch6g2443 889 FunFam Mitogen-activated protein kinase kinase kinase 405 687 - -
Mch6g2443 889 CDD STKc_MEKK1_plant 406 663 - -
Mch6g2443 889 SUPERFAMILY Protein kinase-like (PK-like) 405 751 IPR011009 -
Mch6g2443 889 MobiDBLite consensus disorder prediction 738 778 - -
Mch6g2443 889 Gene3D Transferase(Phosphotransferase) domain 1 405 680 - -
Mch6g2443 889 ProSitePatterns Protein kinases ATP-binding region signature. 413 436 IPR017441 GO:0005524(InterPro)
Mch6g2443 889 MobiDBLite consensus disorder prediction 374 393 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g1196 Mch-Chr1:14334790 Mch6g2443 Mch-Chr6:26371577 9.47E-106 dispersed
Mch4g1725 Mch-Chr4:20390179 Mch6g2443 Mch-Chr6:26371577 1.01E-72 dispersed
Mch6g2443 Mch-Chr6:26371577 Mch8g0724 Mch-Chr8:5136400 1.18E-101 dispersed
Mch1g1011 Mch-Chr1:13125884 Mch6g2443 Mch-Chr6:26371577 2.42E-142 transposed
Mch10g0143 Mch-Chr10:856718 Mch6g2443 Mch-Chr6:26371577 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77519 PF00069 Pkinase 1.20E-71 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g2443 K20717 - csv:101222716 1666.36