Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch6g2469 | ATGGCGTTGGCGGTGAAGGCGTTTCCGTTGACTGTGGCGGCTCACGTGGTGGGCACGGTGGCGCTGATTCTGGTCCTCTTCTGGGCCATCCATTTCAGAGGCGGCCTCGCCTGGGATGCCATCAACAAGAACCTCATCTTCAACATCCATCCTGTTCTTATGCTGCTCGGATTGATCATCATAGGAGGTGAAGCAATAATTAGTTATAAAGCTCTGCCATTGAAGAAAGAAGTGAAGAAATTGATCCATTTGGTGCTACACGGCGTAGCATTGGTACTGGGTATTGTGGGCATCAGCGCTGCGTTCAAGAACCATAATGAGAGTGGGATCCCCAATCTTTACAGCTTGCATTCTTGGATTGGTATTGCCGTTATTGTCCTCTATGGTCTTCAGTGGCTGTACGGGCTGGTGACGTTCTACTATCCCGGAGGGTCCGAAAATGTTCGAAGGGCGTCACTTCCGTGGCACGTGATCTTCGGTATCACTGTGTACATATTGGCCGCCGGCAACTCGGCGCTCGGCTTTCTGGAGAAACTGACGTTTCTCGAGAGCTCCGGCGGCGTAGACAAGTACGGCGCCGAGGCGTTCCTCGTGAACTTCACGGCCATCACCACCATTCTTTTTGCAGTGTTGGTGCTTTTATCAGTTGCTTCTCAGCCGTCCGATGAAGCTGCTGCAGATGGCCATGGCGACTATTCTTCCATATGA | 708 | 51.98 | MALAVKAFPLTVAAHVVGTVALILVLFWAIHFRGGLAWDAINKNLIFNIHPVLMLLGLIIIGGEAIISYKALPLKKEVKKLIHLVLHGVALVLGIVGISAAFKNHNESGIPNLYSLHSWIGIAVIVLYGLQWLYGLVTFYYPGGSENVRRASLPWHVIFGITVYILAAGNSALGFLEKLTFLESSGGVDKYGAEAFLVNFTAITTILFAVLVLLSVASQPSDEAAADGHGDYSSI | 235 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 26588270 | 26592582 | + | MC06g1918 | Mch6g2469 | 691916 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch6g2469 | 235 | FunFam | Cytochrome b reductase 1 | 4 | 225 | - | - | |
| Mch6g2469 | 235 | CDD | Cyt_b561_ACYB-1_like | 42 | 183 | - | - | |
| Mch6g2469 | 235 | Gene3D | - | 2 | 225 | - | - | |
| Mch6g2469 | 235 | Pfam | Eukaryotic cytochrome b561 | 49 | 181 | IPR006593 | - | |
| Mch6g2469 | 235 | ProSiteProfiles | Cytochrome b561 domain profile. | 13 | 217 | IPR006593 | - | |
| Mch6g2469 | 235 | PANTHER | CYTOCHROME B561-RELATED | 4 | 220 | IPR043205 | GO:0016491(InterPro)|GO:0016491(PANTHER) | |
| Mch6g2469 | 235 | SMART | 561_7 | 49 | 175 | IPR006593 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch6g2469 | Mch-Chr6:26588270 | Mch9g1251 | Mch-Chr9:14298809 | 1.72E-58 | dispersed | |
| Mch6g2469 | Mch-Chr6:26588270 | Mch4g2425 | Mch-Chr4:25229350 | 1.70E-71 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch6g2469 | K08360 | - | csv:101209308 | 339.347 |