Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g2545 ATGTCCGACCCGCCGCCCTCCAATCATGATCCCTCCACCACGCCCCACCACTCCCCCTCCGCTTCCGCCGCCGCCAAGCTCCGCAAGATCCCCCCCATCCCCGTTCGCCGAGATTCCAAACACATTGCCAATGCCGGAGGAGACTCCGACGCCGATCACCATCACCAGGACCCTCACCACGACGCCGACGATCGCGTTGATCAGTCTGCCGATTCCTCCATTCTTATGGCCTCCTCCCTCGGGTTGAACCACATTCGCACGCGCTCCGCTCCTTTGCCCCTTCGAACCTCTGCAGTTGGTACGCCCTCCAATTTGGGAGATAGTTCCAGGAATAATGCCACCGCCGAGGTTGAGTCCGACCCAAAACCTTCCTTCACTGAACACGGGAAAAAAGTTTTGTGCAGTCAATCGAAATCATTAAGATATCCCTCCGCATTGAATCATGATTTTGAGGTTAATCATGCTGCATTCGCAAAGGAAATCCAGTCTCCACGATTCCGTGCAATACTGCGTGTTACTAGTGGAAGAAAGAAGAGAACCCCAGACATCAAAAGCTTCTCCCACGAGCTCAATTCAAAAGGAGTTCGGCCTTTTCCAGTTTGGAAGCCTCGGGCATTTGGACATTTGGAAGAGATCATGGTGGCAATCAGAGCAAAATTTGACAGATTGAAGGATGATGTTAATTACGAACTGGGCATATTTGCTGGAGACCTAGTAGATATACTTGAAAAGACAGACGAGTCTCAACCTGAACTTAAAGAGGGTTTGGAGGATTTATTGGTGGTTGCTCGGAAATGCGCCACAATGTCACCAAGTGAGTTCTGGACGAAGGGTGAAGGTATTGTCCAGAATTTAGACGACCGGCGCCAGGAGCTGTCATTGGGAATTCTTAAGCAAGCCCACACCCGCCTTCTTTTCATCTTGACACGATGTACTCGGCTTATACAGTTCAGAAAGGAGAGTGGTTATGAAGATGATCATGTTTTGGGTCTTCACCAACTTAGTGATCTAGGAATTTATCCAGAGAAAATTAGGCAGCTTGAACAACTTGAATTTGATGGTCCATTGCCTGGGAAGGAAGAGATTGAGAAGCAGCTGAAGTTAGTTGGGAAGGATCAAGCCAGTCTCATAGTGAAGCAAGATTTAGATCAAAATTTTAGTAGTAGTGCTGGAAATTCTGATCCGGACACTGCCGTAAGTATTGATTCATCTACAAGCATATATAGGATGTCATCCTGGAAAAAGCTACCATCAGCAGCTGAGAAGAATCGGAAAGACTCTGACTCTATTGGTACACCTTCCAAGGATAAACTAGAACAGTTGCATGTACAAGAAGCTAAAAGTGAGAGTAACAACCATTTAGGTATGCCACCTGTTCATCTTGAGCATTCGGAAGCACCACCTAAAGAACAAAAAGTATCTTGGGGAATATGGGGTTATCAGCAAAATGCCACTTTTGAGAACTTGATGATTTGTCGGATTTGTGAGGTTGAAATTCCGACTATTCATGTTGAGGAGCATTCTCGAATATGTACAATTGCTGATAGGTGTGATTTTAAAGGTTTAACTGTGAACGAGCGCCTTGAACGGGTTGCTGCAGCTCTTGAAAAGATACTAGACTCTTGGACGCCAAAAAGTTCACCAAGAAGTAGTGATACTTCCTGTGGAAATTTTGATACTGTTAAAGTTTCTACTTCAAGCATACAAGAAGAGATTTTTGAGTTGTCATCTAAAGGAATCAGTTTGTCATGTCAAAACTCAGAAGATATGCTTGATTCCCTCCCTGTTACTGGCAACACCTCCTTCATGGATAATCAGGATATCTTTCCTGATCCATCATACAATCGACATTTTGTTTTCACACCAGATCACAGCACAAAATCAATGTCAGCTGGAACTCTAACACCAAGATCACCTCTTTTAACACCGAGATCCAGCCAGATTGAATTTTTATTGCATGGGCGAAGAGCAATATCTGAACTTGAAAATTATCAGCAGGTATACAAATTATTGGATATCGTTCGTTCCATTGCAAATGTTAACAACTCTGACTATGGTGCATTGGAGTATATGATTGATCGGTTAGGAGACCTTAAATATGCAATCCAGGATAGGAAGGTGGATGCTCTAGTTGTAGAGACTTTTGGAAGGCGCATAGAGAAGCTCTTGCAGGAAAAGTATGTACATCTGTGTGGGCAAATAGATGATGATAAAGTAGACTCTTCAAATGGCATGGTTGATGAAGAGAGTTCAGTGGATGATGATACTGTTCGTAGTTTGCGTGCAAGTCCTGTTAACACATGTTCAAGAGATCGAACATCTATTGAAGATTTTGAAATAATTAAACCAATTAGCAGAGGGGCGTATGGCCGTGTTTTCCTTGCCAGAAAAAGAGCAACTGGTGACTTGTTTGCAATAAAGGTTTTAAAGAAAGCTGATATGATTCGCAAGAATGCAGTTGAAAGTATTTTGGCTGAGCGTAATATCCTTATCTCAGTTCGCAACCCTTTTGTGGTTAGTTGGGAAAATCTTTATCTGGTCATGGAATACTTAAATGGTGGTGATATTTACTCCTTACTGAGAAACTTACGATGCTTAGACGAAAATATGGCTCGTATATACATCGCTGAAGTTGTTCTTGCTTTGGAGTATTTGCATTCCTTGAATGTGATTCACAGAGACTTAAAGCCAGATAACTTATTGATTGGTCAAGATGGTCACATTAAGTTGACAGATTTTGGGCTCTCCAAGATTGGTCTTATCAATAGTACAGATGATTTCTCAGGTCCATCAATCAGTGGAACTACTTCACTTGGAGACAATGGGGCAACATCTCAATCTTTGTCAAAGAGAGAACACAGACAAAAGCACTCAGTTGTTGGTACTCCGGATTATTTGGCCCCAGAGATACTTCTGGGCATGGGACATGGTGTAACTGCTGATTGGTGGTCGGTTGGAGTTATTCTTTTTGAGATGCTTGTAGGAGTACCGCCATTCAATGCAGAAAGTCCACAGGTTGAATTTGCCTCTGATATTCTTAACTCTCTAATGCAAATTTTTGATAATATAATTAATAGAGACATACATTGGCCCGAGGTACCTGAAGAGATGAGTCGTGAAGCCTATGATTTGATCGACAAATTGCTGACTGAAAATTCAGTTCAAAGACTGGGAGCAACAGGGGCCAGAGAGGTGAAGCAGCATCCTTTCTTCGCAAATATTAACTGGGAAACACTTGCAAGGCAGAAGGCAATGTTTATACCGTCAGCAGAGCCGCATGATACAAGTTATTTCATGAGCCGTTATATATGGAATCCAGAAGATGAGGATTTTAATGGTGGAAGTGACTTTGATGAACATGATTTGACTGATACTTGCAGCAGTAGTTCATTCAGCATCCTACCAGATGAAGATGGGGATGAATGTGGTAGTTTGGCTGATTTCGGTGCACCAGCTCTTTCTGTGAAGTACTCGTTCAGCAACTTCTCTTTCAAGAACTTATCACAGCTGGCTTCCATCAATTATGATTTGGTTGTGAAGAGCAGTCAAAACTCACCAGATGTAACCAAGCCATCCATTCCT 3582 42.96 MSDPPPSNHDPSTTPHHSPSASAAAKLRKIPPIPVRRDSKHIANAGGDSDADHHHQDPHHDADDRVDQSADSSILMASSLGLNHIRTRSAPLPLRTSAVGTPSNLGDSSRNNATAEVESDPKPSFTEHGKKVLCSQSKSLRYPSALNHDFEVNHAAFAKEIQSPRFRAILRVTSGRKKRTPDIKSFSHELNSKGVRPFPVWKPRAFGHLEEIMVAIRAKFDRLKDDVNYELGIFAGDLVDILEKTDESQPELKEGLEDLLVVARKCATMSPSEFWTKGEGIVQNLDDRRQELSLGILKQAHTRLLFILTRCTRLIQFRKESGYEDDHVLGLHQLSDLGIYPEKIRQLEQLEFDGPLPGKEEIEKQLKLVGKDQASLIVKQDLDQNFSSSAGNSDPDTAVSIDSSTSIYRMSSWKKLPSAAEKNRKDSDSIGTPSKDKLEQLHVQEAKSESNNHLGMPPVHLEHSEAPPKEQKVSWGIWGYQQNATFENLMICRICEVEIPTIHVEEHSRICTIADRCDFKGLTVNERLERVAAALEKILDSWTPKSSPRSSDTSCGNFDTVKVSTSSIQEEIFELSSKGISLSCQNSEDMLDSLPVTGNTSFMDNQDIFPDPSYNRHFVFTPDHSTKSMSAGTLTPRSPLLTPRSSQIEFLLHGRRAISELENYQQVYKLLDIVRSIANVNNSDYGALEYMIDRLGDLKYAIQDRKVDALVVETFGRRIEKLLQEKYVHLCGQIDDDKVDSSNGMVDEESSVDDDTVRSLRASPVNTCSRDRTSIEDFEIIKPISRGAYGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVSWENLYLVMEYLNGGDIYSLLRNLRCLDENMARIYIAEVVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKIGLINSTDDFSGPSISGTTSLGDNGATSQSLSKREHRQKHSVVGTPDYLAPEILLGMGHGVTADWWSVGVILFEMLVGVPPFNAESPQVEFASDILNSLMQIFDNIINRDIHWPEVPEEMSREAYDLIDKLLTENSVQRLGATGAREVKQHPFFANINWETLARQKAMFIPSAEPHDTSYFMSRYIWNPEDEDFNGGSDFDEHDLTDTCSSSSFSILPDEDGDECGSLADFGAPALSVKYSFSNFSFKNLSQLASINYDLVVKSSQNSPDVTKPSIP 1194
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 27350844 27364689 - MC06g1985 Mch6g2545 691992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g2545 1194 ProSitePatterns Serine/Threonine protein kinases active-site signature. 890 902 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch6g2545 1194 MobiDBLite consensus disorder prediction 932 946 - -
Mch6g2545 1194 PANTHER SERINE/THREONINE-PROTEIN KINASE 482 1166 IPR050236 GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER)
Mch6g2545 1194 MobiDBLite consensus disorder prediction 31 68 - -
Mch6g2545 1194 MobiDBLite consensus disorder prediction 93 129 - -
Mch6g2545 1194 Gene3D Transferase(Phosphotransferase) domain 1 851 1088 - -
Mch6g2545 1194 MobiDBLite consensus disorder prediction 94 119 - -
Mch6g2545 1194 ProSiteProfiles AGC-kinase C-terminal domain profile. 1072 1174 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g2545 1194 MobiDBLite consensus disorder prediction 932 956 - -
Mch6g2545 1194 CDD STKc_MAST_like 784 1076 - -
Mch6g2545 1194 MobiDBLite consensus disorder prediction 444 465 - -
Mch6g2545 1194 SMART serkin_6 778 1071 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g2545 1194 FunFam Probable serine/threonine-protein kinase cot-1 854 1092 - -
Mch6g2545 1194 SUPERFAMILY Protein kinase-like (PK-like) 775 1102 IPR011009 -
Mch6g2545 1194 Gene3D Phosphorylase Kinase; domain 1 775 1102 - -
Mch6g2545 1194 MobiDBLite consensus disorder prediction 1 70 - -
Mch6g2545 1194 ProSiteProfiles Protein kinase domain profile. 778 1071 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g2545 1194 Pfam Protein kinase domain 779 1071 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g1802 Mch-Chr3:19220445 Mch6g2545 Mch-Chr6:27350844 0 dispersed
Mch6g2545 Mch-Chr6:27350844 Mch7g0952 Mch-Chr7:13933984 4.78E-71 dispersed
Mch9g2347 Mch-Chr9:23460276 Mch6g2545 Mch-Chr6:27350844 6.05E-20 dispersed
Mch6g2545 Mch-Chr6:27350844 Mch11g0433 Mch-Chr11:2716606 1.35E-66 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77522 PF00069 Pkinase 5.50E-60 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g2545 K08789 - csv:101210442 1901.72