Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g2551 ATGGAGGAGAAAGAGGGCGTGGATTTCGGGTTTGCAGTAAAGGTGAGGGAAGCTCCAGAAAGCCTCGGGATGATGGATTCGAGACCGGAAAATAGTAGCGCAGATGGTGAGCCGGCAGTAGCTGCGGCGGCGGCGGCGGGTACAGATGGAAAGAAGAAGAGAGGGAGGCCAAGAAAGTACGGCCCCGATGGGAAAATGGCGCCAACGTTGTCACCAATGCCGATTTCGTCGTCGATTCCGCTAACAGGAGAATTTTCAGGCTGGAAACGGGGCAGAGGGCGGTCGGTGGAGTCCATTAAGAAGTCGCGCAAGTACGAGTATGAGATTCCTCCAGGTAACAAGGTTGCTTTCTTTGCTGGTGCAGATTTCACACCTCACGTGATCACTGTTAATATTGGTGAGGATGTTAACTTGAAAGTCATGTCATTTTCCCAACAAGGATGTCGTGCTATTTGTATACTCTCTGCTAATGGTATGGTTTCAAATGTTACACTTCGGCAATCAACATCTTCTGGGGGTACTCTAACATATGAGGGTCGTTTTGAGATACTTTCATTGTCTGGTTCATACATGCCTTCTGAAAGTGGTGGAACAAAGAGCCGATCTGGAGGGATGAGTGTCTCTTTGGCTGGCCCAGATGGCCGAGTGATGGGTGGAGGACTCGCCGGCATGCTGATAGCAGCTGGTCCAGTGCAGGTGGTGGTGGGCAGTTTTCTACTACCAGGTCACCAGCAGGAAAATAAACCAAAGAAGAGCAGGACTGAACCTGCAGCTTTATCACCTCCAGCTAATGTCTTTTCTGGCGAAGCGACAAAGGGAGTCTTTGGAGGAGTGAAGCATTCCACTCTAATCGGAGATAAAGCAGCTTCTTTAGACCCAACTCCAGCTTGTAGAACTCCACCGGCCAATGAAAAATTGCCTTACCCAGAAGAATCGAGGGGTGGCTTCAACCAATCAAACCATGAGGTTTCTTGTTGA 978 49.69 MEEKEGVDFGFAVKVREAPESLGMMDSRPENSSADGEPAVAAAAAAGTDGKKKRGRPRKYGPDGKMAPTLSPMPISSSIPLTGEFSGWKRGRGRSVESIKKSRKYEYEIPPGNKVAFFAGADFTPHVITVNIGEDVNLKVMSFSQQGCRAICILSANGMVSNVTLRQSTSSGGTLTYEGRFEILSLSGSYMPSESGGTKSRSGGMSVSLAGPDGRVMGGGLAGMLIAAGPVQVVVGSFLLPGHQQENKPKKSRTEPAALSPPANVFSGEATKGVFGGVKHSTLIGDKAASLDPTPACRTPPANEKLPYPEESRGGFNQSNHEVSC 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 27402797 27409806 + MC06g1991 Mch6g2551 691998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g2551 325 MobiDBLite consensus disorder prediction 18 73 - -
Mch6g2551 325 Gene3D - 125 255 - -
Mch6g2551 325 CDD DUF296 124 238 IPR005175 -
Mch6g2551 325 MobiDBLite consensus disorder prediction 286 325 - -
Mch6g2551 325 MobiDBLite consensus disorder prediction 242 266 - -
Mch6g2551 325 SUPERFAMILY AF0104/ALDC/Ptd012-like 122 247 - -
Mch6g2551 325 ProSiteProfiles PPC domain profile profile. 120 262 IPR005175 -
Mch6g2551 325 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 38 259 IPR039605 GO:0003680(InterPro)
Mch6g2551 325 FunFam AT-hook motif nuclear-localized protein 1-like 125 256 - -
Mch6g2551 325 Pfam Plants and Prokaryotes Conserved (PCC) domain 125 238 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g2551 Mch-Chr6:27402797 Mch6g2581 Mch-Chr6:27682019 3.36E-83 dispersed
Mch6g2551 Mch-Chr6:27402797 Mch10g0229 Mch-Chr10:1411474 3.04E-107 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g2551 - - - 0.0