Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g2581 ATGGAGGGAAGGGAAGGTGGTGGTGGTGCAAGTAGTGGGGTTACTGTGGTGGGATCAGATGCTCCGTCGGAGTATCAAATAGCTCCGAGGACTGAAAACCCAACACCGCAGACCGGCGGATCAGCGCCGCCGCCGCCGCCGCCGCCGTCGTCGGCGACTCAAGCAGCTTCGACACCGTCGGCGTCGGCTCAGGCGGGTGGGCAACCTCCTCCGCTCGCGGCGGCCTCCTCAGTTCCGGGAAAGAAGAAAAGAGGGAGGCCAAGAAAGTATGGACCCGACGGCTCTGTCACTATGGCGCTGTCTCCGAAGCCGATATCGTCTTCGGTGCCGCCGCCGGTGATCGACTTCTCAACGGAGAAGCGGGGGAAGGTACGACCGGCGAGCGCAGTGAGCAAAACCAAGTTCGAGTTGGAAAATTTAGGTGACTGGGTTCCATGTTCTGTTGGTGCAAATTTTACACCTCATATCATCACTGTCAATACGGGCGAGGATGTCACGATGAAGATAATATCCTTTTCGCAACAAGGGCCTCGAGCTATATGCATTTTGTCCGCAAACGGTGTGATCTCGAGTGTTACTCTCCGCCAGCCTGACTCTTCTGGAGGAACTCTAACATATGAGGGTCGTTTTGAAATATTGTCATTGTCTGGCTCATTCATGCCTAATGACAATGGAGGAACTAGAAGTAGATCTGGTGGAATGAGTGTTTCCTTAGCAAGTCCAGACGGGCGTGTCGTTGGTGGTGGAGTAGCAGGTCTATTAGTAGCTGCAAGTCCTGTTCAGGTCGTAGTAGGGAGTTTTCTTTCTGGAAACCAACACGAGCAGAAAACTAAAAAGACAAAACAAGATACCATTTCAGCGGCCCCCCCAACTGCTGCTATTCCGATATCTTGCGTCGATCCCAAGTCCAACCTCTCGCCTTCCAGTTCGTTTCGTGGCGATAACTGGTCGTTGCTCCCAAACGATTCGAGGAATAAGCCAACCGATATCAATGTATCTCTACCCAGTGCATGA 1014 53.06 MEGREGGGGASSGVTVVGSDAPSEYQIAPRTENPTPQTGGSAPPPPPPPSSATQAASTPSASAQAGGQPPPLAAASSVPGKKKRGRPRKYGPDGSVTMALSPKPISSSVPPPVIDFSTEKRGKVRPASAVSKTKFELENLGDWVPCSVGANFTPHIITVNTGEDVTMKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPNDNGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQHEQKTKKTKQDTISAAPPTAAIPISCVDPKSNLSPSSSFRGDNWSLLPNDSRNKPTDINVSLPSA 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 27682019 27686385 + MC06g2018 Mch6g2581 692028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g2581 337 MobiDBLite consensus disorder prediction 301 337 - -
Mch6g2581 337 MobiDBLite consensus disorder prediction 298 337 - -
Mch6g2581 337 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 45 316 IPR039605 GO:0003680(InterPro)
Mch6g2581 337 CDD DUF296 153 244 IPR005175 -
Mch6g2581 337 Gene3D - 154 288 - -
Mch6g2581 337 MobiDBLite consensus disorder prediction 1 112 - -
Mch6g2581 337 ProSiteProfiles PPC domain profile profile. 149 288 IPR005175 -
Mch6g2581 337 MobiDBLite consensus disorder prediction 38 53 - -
Mch6g2581 337 SUPERFAMILY AF0104/ALDC/Ptd012-like 151 280 - -
Mch6g2581 337 Pfam Plants and Prokaryotes Conserved (PCC) domain 154 267 IPR005175 -
Mch6g2581 337 FunFam AT-hook motif nuclear-localized protein 1-like 154 285 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0229 Mch-Chr10:1411474 Mch6g2581 Mch-Chr6:27682019 1.07E-84 dispersed
Mch10g1504 Mch-Chr10:15008879 Mch6g2581 Mch-Chr6:27682019 2.72E-131 dispersed
Mch5g0316 Mch-Chr5:2139756 Mch6g2581 Mch-Chr6:27682019 3.60E-111 dispersed
Mch6g2551 Mch-Chr6:27402797 Mch6g2581 Mch-Chr6:27682019 3.36E-83 dispersed
Mch6g2581 Mch-Chr6:27682019 Mch7g0683 Mch-Chr7:11542434 1.20E-74 dispersed
Mch6g2578 Mch-Chr6:27638872 Mch6g2581 Mch-Chr6:27682019 3.11E-20 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g2581 - - - 0.0