Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch6g2598 | ATGGAACCCACCTCCGATTTCCTCCAAAGTCTCGCCGATTCTCTCAATTTCTTGTTTCCATGGCGGTGGATCCACGGCGGCGACAACCAATCGCGATTTCTGTTCACCGCCTTCGCCGCTTTACTGATTTTTCTTTATGTCAAAGTCTTCCGGCGGCGCGTGCCTCTGCCACCGGGTCCACGCGGCGTTCCACTGCTCGGAAATCTGCCGTTTCTCGACCCAGAGCTGCACACCTACTTCACGGAACTGGGCCGGAAATACGGGCCAATCGTAAAGCTCCAGCTTGGCAAGAAGATGGGTATAATCGTAAACTCACCATCCGTGGCTCGTGAGATGCTGAAGGATCACGACATCACGTTCGCCAATCGCGACGTTACTGAGGCCGGGAGAGCCGCCTCGTACGGCGGCTCCGACATAGCGTGGAGCCAGTACGGAGCCGAGTGGCGGATGTTGAGAAAAGTAAGCGTGCACAAGATGCTGAACAACGCCACTCTGGACTCCGTCTACGACCTCCGCCGGCGGGAGGTCAGAAGCACCGTCGCGCACTTGTACCGGCGGGCCGGGTCTCCGGTCAACATCGGGGAGCAGGGTTTTTTGACGGTTTTCAACGTGATGACGAGCATGCTGTGGGGTGGGACGGTGGAGGAGGAGCAGAGGGACGGCATGGCGGCGGAGTTCAGAGCGGCGGTGTCGGATCTGACGGAGCTGCTCATCAAGCCTAATGTATCGGACTTTTTTCCGAGCCTGGCCCGGTTCGATCTCCAGGGTATTGAGAAGCAGATGCGGACGAAGCTGGTCCCCAGATTTGATAATATCTTCGATAAGATGATCAATCAACGGCTGGGATTTTCTGAAGGTGAAGCGAAGAGAAATGATTTTTTGCAGTTCTTGCTGGAGGTCAAAGATGAAGGCGACTCCAAAACTCCTCTATCCATGACCCACCTCAAAGCCTTGCTTATGGACATGGTGATTGGCGGGACGGACACATCGTCAAACACCATAGAGTTTGCAATGGCAGAGATGATGAAAAACCCACAGGTCCTAAAGAAAGCGCAACAAGAACTAGCCGCCGTGGTGGGTGAAGACAACATCGTAGAAGAGTCCCACATCCAAAGCCTCCCATATCTCAAAGCCGTAATGAAAGAAACCCTGCGTCTGCACCCAATTCTGCCGCTGCTGGTGCCCCACTGCCCGAGCCAGACCACAATCATCTCCAAATACGCAGTCCCAGAGGGGTCCCGCGTGTTCATCAACGTTTGGGCAATCCAACGGGACCCCAACAATTGGGAAGATCCGCTGAGGTTTGATCCCGAGAGGTTTATGGATTCTAAGTGGGATTTCGGTGGGAGCGATTTCCGTTACTTTCCATTCGGGTCCGGGAGAAGAAACTGCGCGGGAATAGCCATGGCGGAGAGAATGTTTATGTATTTGCTTGCCACGCTGTTGCATTCGTTCGATTGGAAATTGAAAGACGGCGAGAAAGTGGAGACTGACGAAAAATTTGGGATTGTTATGAAGATGAAGACGCCTCTTGTTGCCATTCCCATGCCCAGGCTATCTAATCCCACTCTTTATCTTTATCTCCGTTCCCTTCGTCTTCTTCTTTTCATTTTGGTAGATTCATCAAATGAAGACAAACAAATTTCCATCGCTGTTCTCTCTATCTTCGTCTTGATTTTTGCCCTATTCTGGTTCCGACGCTCCGGCGAACCCAAACTCCGGCTTCCCCCTTCGCCTCCGAGCCCCCGTGGCCTGCCGCTGCTCGGATACCTTCCATTTTTATCCCTCAATCTCCACCGTACCTTCGCCGATCTGGCTGGAATCTACAGCCCAGTTTTCAAGCTCCGCCTCGGAACCAAGCTCTGCGTCGTCCTCACCTCCCCTTCCGCCGTCAATGAGGCCCTCCACCGGCAAGATACCGTATTCGCCAACAGAGATCCCACCGTTTGCGCTCTTCTCGCTTCCTACGGCGGCTCCGACATTGTCATCACCTCCGACGGCGCCGATTGGAAGAAGCTGAGGAAAATCTTCGCCCGGAAAATGCTTAGCAAATCGAATCTCGAAGCGTCCTATTGCGTGCGGAGGCGGGAGGTGAGGGAGGCGATTAAAGGCGTTTTTGAATCGGCCGGAACCCCAATAGACGTCGGCGAAGTGGGTTTCTTGGCGACTCTGAAATCGGTCATGGCGATGATATTTGGCGGCGCGGGGCGGCGGATCGGCGGCGATTTGGAAGGTGATTTAAGGGAAAAAATGGGTGAATTGATGGTGTTGTTAGGGACTCCAAATGTGTCTGATATTTTTCCGGCGTTGGGTGGGTTTGATTTGCAGGGGATTGGGAGGAGGACGAAGGAGGTGATGCTTATGATTGATGAGATT | 2376 | 53.49 | MEPTSDFLQSLADSLNFLFPWRWIHGGDNQSRFLFTAFAALLIFLYVKVFRRRVPLPPGPRGVPLLGNLPFLDPELHTYFTELGRKYGPIVKLQLGKKMGIIVNSPSVAREMLKDHDITFANRDVTEAGRAASYGGSDIAWSQYGAEWRMLRKVSVHKMLNNATLDSVYDLRRREVRSTVAHLYRRAGSPVNIGEQGFLTVFNVMTSMLWGGTVEEEQRDGMAAEFRAAVSDLTELLIKPNVSDFFPSLARFDLQGIEKQMRTKLVPRFDNIFDKMINQRLGFSEGEAKRNDFLQFLLEVKDEGDSKTPLSMTHLKALLMDMVIGGTDTSSNTIEFAMAEMMKNPQVLKKAQQELAAVVGEDNIVEESHIQSLPYLKAVMKETLRLHPILPLLVPHCPSQTTIISKYAVPEGSRVFINVWAIQRDPNNWEDPLRFDPERFMDSKWDFGGSDFRYFPFGSGRRNCAGIAMAERMFMYLLATLLHSFDWKLKDGEKVETDEKFGIVMKMKTPLVAIPMPRLSNPTLYLYLRSLRLLLFILVDSSNEDKQISIAVLSIFVLIFALFWFRRSGEPKLRLPPSPPSPRGLPLLGYLPFLSLNLHRTFADLAGIYSPVFKLRLGTKLCVVLTSPSAVNEALHRQDTVFANRDPTVCALLASYGGSDIVITSDGADWKKLRKIFARKMLSKSNLEASYCVRRREVREAIKGVFESAGTPIDVGEVGFLATLKSVMAMIFGGAGRRIGGDLEGDLREKMGELMVLLGTPNVSDIFPALGGFDLQGIGRRTKEVMLMIDEI | 792 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 27802202 | 27812020 | - | MC06g2031 | Mch6g2598 | 692045 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch6g2598 | 792 | PANTHER | OS08G0547900 PROTEIN | 35 | 525 | - | - | |
| Mch6g2598 | 792 | Gene3D | Cytochrome P450 | 46 | 513 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g2598 | 792 | PRINTS | P450 superfamily signature | 455 | 464 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g2598 | 792 | PRINTS | P450 superfamily signature | 378 | 389 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g2598 | 792 | PRINTS | P450 superfamily signature | 325 | 342 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g2598 | 792 | SUPERFAMILY | Cytochrome P450 | 57 | 518 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g2598 | 792 | CDD | CYP76-like | 85 | 515 | - | - | |
| Mch6g2598 | 792 | FunFam | Cytochrome P450 76C4 | 49 | 514 | - | - | |
| Mch6g2598 | 792 | Pfam | Cytochrome P450 | 579 | 790 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g2598 | 792 | Pfam | Cytochrome P450 | 57 | 509 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g2598 | 792 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 457 | 466 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch6g2598 | 792 | SUPERFAMILY | Cytochrome P450 | 579 | 790 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g2598 | 792 | Gene3D | Cytochrome P450 | 573 | 792 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g2598 | 792 | PRINTS | E-class P450 group I signature | 314 | 331 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g2598 | 792 | PRINTS | E-class P450 group I signature | 464 | 487 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g2598 | 792 | PRINTS | E-class P450 group I signature | 200 | 218 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g2598 | 792 | PRINTS | E-class P450 group I signature | 418 | 442 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g2598 | 792 | PRINTS | E-class P450 group I signature | 84 | 103 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g2598 | 792 | PRINTS | E-class P450 group I signature | 377 | 395 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g2598 | 792 | PRINTS | E-class P450 group I signature | 108 | 129 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g2598 | 792 | PRINTS | E-class P450 group I signature | 454 | 464 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch6g2598 | 792 | PRINTS | E-class P450 group I signature | 334 | 360 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch6g1796 | Mch-Chr6:20486592 | Mch6g2598 | Mch-Chr6:27802202 | 1.01E-33 | dispersed | |
| Mch6g1798 | Mch-Chr6:20502090 | Mch6g2598 | Mch-Chr6:27802202 | 7.56E-299 | dispersed | |
| Mch6g2567 | Mch-Chr6:27558491 | Mch6g2598 | Mch-Chr6:27802202 | 1.07E-113 | dispersed | |
| Mch6g2598 | Mch-Chr6:27802202 | Mch8g1025 | Mch-Chr8:7237681 | 1.81E-102 | dispersed | |
| Mch6g2598 | Mch-Chr6:27802202 | Mch3g1399 | Mch-Chr3:16503374 | 7.83E-108 | transposed |
Pathway information