Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g2601 ATTTTGGCGCCAACCACGTACATATTTTTTGCTTCTGCGCTCCCGGTCATTGCTTTTGGCGAGCAGTTGAGTAGGGATACAGATGGAAGCTTAAGCACAGTTGAAGCATCGGCTTCAACAGCGATTTGTGGGATTATTCACTCCATTTTTGGTGGGCAGCCCCTTGTCATAGTAGGAGTTGCAGAGCCCACCATTGTTATGTACACCTATTTGTATGACTTTGCCAAGGATAGGAAACATTTGGGAGCACAACTTTTCCTTGCATGGGCTGGATGGGTTTGCGTGTGGACGGCTGTGATGTTGATGGTTATGGCAATATTCAACGCGGGCCGTCTAATCAACAGATTCACAAGAATTGCAGGGGAACTTTTTGCCATCTTGATTTCTGTTTTGTTCATTCAACAAGCTATCAAGGGAATGGTAGGAGAGTTTAAAATTCCGAAAGCAGAGAATCAAAATTTGGAGAAGTATGAGTTTCATTGGCTTTACACAAATGGATTGCTTGGAATCATATTTACTTCTGGAGTTTCCTACACTGCTTTGAAAAGTAGAAAGGGCAGGTCATGGTTGTATGCCACAGGGTGGTTGAGAAGCTTGATTGCAGACTATGGAGTTCCTGTTATGGTTCTTGTATGGACTGCATTATCATTTAGTGTACCTTCCAAAATTCCCTCTGGAGTTCCTAGAAGACTCCAAAGCCCTTTGCCATGGGAATCTGCCTCTTTATACCATTGGACTGTGGTCAAGGATATGGGGAAAATTCCTCCCACATATATCTCTGCTGCCTTTGTTCCTGCTGTGATGATTGCTGGACTTTACTTTTTTGATCATAGCGTTGCTTCTCAATTGGCACAACAAAAGGAGTTTAATCTTAAGAACCCTTCTTATCACTACGACATCTTGTTGCTCGGATTTATGACTTTACTTTGTGGGTTGCTTGGGCTCCCTCCTTCAAATGGGGTTTTGCCACAGTCCCCCATGCATACCAAAAGCCTTGCAGTTCTTAAGAGACAGTTGATACGAAAAAAGATGGTTGAAAGTGCCAAGGAAGGCATTAAAAAGAAAGCTACCAACTCAGAAATCTATGTCCAGATGCAAGATGTATTCATTGAAATGGATAGCAGCCCAGTCCCAAAACTTACGGAGATGGCTGGAGTGGTGAAAGAACTCGAAGAGTTGAAGGAGGCAGTTACTAAAGAGAACAAGGAAAACAAAGATGAAAATGCAAAAGAAAAATTTGATCATCTTGAGAAGCATATTGATTCCTATCTTCCTGTTAGAGTAAATGAGCAAAGAGTGAGCAATCTGCTTCAATCGGTTCTAGTGGCTGCATCAATTTATGCAATACCAATAGTAAAGAAGATCCCAACTTCCGTGCTTTGGGGATATTTTGCTTATATGGCCATTGATAGCCTTCCCGGAAACCAATTTTGGGAAAGGATTTTGCTCCTCTTCGTAACGCCCAGTCGAAGATACAAGGTCCTAGAAAATGCCCACGCTTCCTTTGTGGAGTCGGTGCCATTCAAATACATAGCCATTTTCACTATCTTTCAACTTGTGTATCTCCTCATTTGCTTTGGAGTTACTTGGATCCCTATAGTTGGAGTCTTGTTTCCCTTGCCTTTCTTCTTCCTCATTGCCATAAGACAACACATCCTTCCCAAGCTCCTCCGATCTCAATACTTGCAAGAGCTCGATGCAGCGGAATATGAAGAAATAGAGGGTTCTCCCAAGACCTCGTTTAGTCTTTCTTTCAAGGGAAAGGATTCTACGCAAATAGTTGAAGATGAAGACGATGTTGAGATATGTGATGCTGAAACATTAGATGTGTTGACAACCAATAGAGGGGAGTTGAAGATTAGAACAAGAAGCTTCAATGAGGATGGACATGGCCAGGTA 1899 42.39 ILAPTTYIFFASALPVIAFGEQLSRDTDGSLSTVEASASTAICGIIHSIFGGQPLVIVGVAEPTIVMYTYLYDFAKDRKHLGAQLFLAWAGWVCVWTAVMLMVMAIFNAGRLINRFTRIAGELFAILISVLFIQQAIKGMVGEFKIPKAENQNLEKYEFHWLYTNGLLGIIFTSGVSYTALKSRKGRSWLYATGWLRSLIADYGVPVMVLVWTALSFSVPSKIPSGVPRRLQSPLPWESASLYHWTVVKDMGKIPPTYISAAFVPAVMIAGLYFFDHSVASQLAQQKEFNLKNPSYHYDILLLGFMTLLCGLLGLPPSNGVLPQSPMHTKSLAVLKRQLIRKKMVESAKEGIKKKATNSEIYVQMQDVFIEMDSSPVPKLTEMAGVVKELEELKEAVTKENKENKDENAKEKFDHLEKHIDSYLPVRVNEQRVSNLLQSVLVAASIYAIPIVKKIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVTPSRRYKVLENAHASFVESVPFKYIAIFTIFQLVYLLICFGVTWIPIVGVLFPLPFFFLIAIRQHILPKLLRSQYLQELDAAEYEEIEGSPKTSFSLSFKGKDSTQIVEDEDDVEICDAETLDVLTTNRGELKIRTRSFNEDGHGQV 633
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 27853078 27860342 + MC06g2033 Mch6g2601 692048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g2601 633 Coils Coil 380 419 - -
Mch6g2601 633 Pfam HCO3- transporter integral membrane domain 2 156 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Mch6g2601 633 Pfam HCO3- transporter integral membrane domain 426 568 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Mch6g2601 633 Pfam HCO3- transporter integral membrane domain 166 338 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Mch6g2601 633 PANTHER ANION EXCHANGE PROTEIN 2 597 IPR003020 GO:0005452(InterPro)|GO:0005886(PANTHER)|GO:0006820(InterPro)|GO:0016020(InterPro)|GO:0022857(PANTHER)|GO:0050801(PANTHER)|GO:0055085(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g2601 Mch-Chr6:27853078 Mch8g0425 Mch-Chr8:3041196 1.29e-311 dispersed
Mch6g2601 Mch-Chr6:27853078 Mch8g1149 Mch-Chr8:8182561 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g2601 K24194 - csv:101210964 952.97