Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g2615 ATGTTCTCCTGCAAAATGGCCCCATCTTCCCTCGCTTCCCGCTTCCGACAATCGGTCACCCCGACCGCACTCCGATCCTATGCCGCCGAGTTCATCTCCACATTCTTCTACGTCTTCTCTGTCGTCGGATCATCCATGGCCTCCCAGAAGATGATGTCGGGCGCTGTTAGGACAGACTCGTCGAATCTTCTCGTGGCAGCCGTTGTCAATGTCTTTGCTTTGGCTTCTGCGGTGTACATTGCAGCCAATATCTCTGGAGGACATGTCAACCCGGCGGTGACATTTGGCATGGCGGTCGGCGGCCACGTCAGTATCCCAACTGCTCTCTTCTATTGGTTTGCCCAGATGCTTGCCTCTGTCATGGCCTGCATTGTTCTTAGAGTCACCATTCTTGGACAGCATGTTCAAAGCTACGCTATTGCGGAGGAAATGACCGGATTCGGAGCATCGGTGGTGGAAGGCATATTAACATTTGCTTTAGTGTACACTGTCTTCGCCGTCGGTGATCCGAAAAGAGATCCATGCAATGCGATTGGAGCCGTGATGGTCGGGCTGATGGCCGGAGCCAATGTGCTGGCTGCGGGGCCGTTCTCCGGTGGGTCGGTGAATCCGGCGTGCGCGTTCGGGTCGGCGATTGTGGCCGGGAGTTTCAAGAACCAGGCAGTGTACTGGGTTGGGCCGTTGATTGGGGCTGCTCTGGCCGGAATTGTTCATGACAATGTGGTTTTTCCGGCTGAAAATGCAGATTCTTTCAGAGGGGTTTCTGAGGCTGTT 774 54.78 MFSCKMAPSSLASRFRQSVTPTALRSYAAEFISTFFYVFSVVGSSMASQKMMSGAVRTDSSNLLVAAVVNVFALASAVYIAANISGGHVNPAVTFGMAVGGHVSIPTALFYWFAQMLASVMACIVLRVTILGQHVQSYAIAEEMTGFGASVVEGILTFALVYTVFAVGDPKRDPCNAIGAVMVGLMAGANVLAAGPFSGGSVNPACAFGSAIVAGSFKNQAVYWVGPLIGAALAGIVHDNVVFPAENADSFRGVSEAV 258
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 27948766 27949920 - MC06g2045 Mch6g2615 692062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g2615 258 Gene3D Glycerol uptake facilitator protein. 10 252 IPR023271 -
Mch6g2615 258 SUPERFAMILY Aquaporin-like 17 246 IPR023271 -
Mch6g2615 258 ProSitePatterns MIP family signature. 88 96 IPR022357 -
Mch6g2615 258 FunFam Probable aquaporin TIP5-1 9 250 - -
Mch6g2615 258 PANTHER AQUAPORIN-8 15 244 IPR034294 GO:0006833(PANTHER)|GO:0015250(PANTHER)|GO:0016020(PANTHER)
Mch6g2615 258 PRINTS Major intrinsic protein family signature 70 94 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch6g2615 258 PRINTS Major intrinsic protein family signature 221 241 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch6g2615 258 PRINTS Major intrinsic protein family signature 107 126 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch6g2615 258 PRINTS Major intrinsic protein family signature 25 44 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch6g2615 258 PRINTS Major intrinsic protein family signature 152 170 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch6g2615 258 PRINTS Major intrinsic protein family signature 184 206 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch6g2615 258 Pfam Major intrinsic protein 20 238 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g2615 Mch-Chr6:27948766 Mch9g1488 Mch-Chr9:17282187 5.98E-21 dispersed
Mch6g2615 Mch-Chr6:27948766 Mch1g0862 Mch-Chr1:12020213 6.24E-55 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g2615 K09873 - csv:101214078 436.802