Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g2623 ATTGTTTGGATATCAGTGGGCATATTGGTGTGCCTGTTCATGGTTCAAAGACTGGGAACTGACAAAGTAGGGTACAGTTTTGCTCCTGTAATCTGCATTTGGTTTGCGTTCAACGCTGGGATTGGAGTTTACAACTTCATCAAATACGACCCAACAGTTTTAAAGGCCTTAAATCCAAAGTACATAGTGGATTATTTCCAAAGGAACAAAAAGGATGCTTGGATTTCTCTCGGCGGCACTGTACTTTCCATCACAGGAACTGAAGCATTATTCGCCGATGTCGGGCATTTCAGCGTTCGATCAGTTCAGCTGAGCATGTCGGCGGTGACCTACCCAGCTCTAATTTGTGCCTACGTAGGTCAGACCGCGTTTCTTCGCAAGCACAGCGATCTCGTTGCAGATACATTCTACAAGTCGATTCCTGGAGGTCTGTATTGGCCAATGTTTGTGGTGGCTGTTTTAGCATCAAGCATAGCAAGCCAGGCCATGATCTCAGGAACTTTCTCTATAATTCAACAGTCGCTTTCACTTGGATGCTTCCCTAGAGTCAAAGTGGTTCATATATCTGATAAGTACGAAGGCCAAGTTTATGTTCCTGAGGTCAATTACCTTCTCATGTTGGCTTGCATTGGGGTCACTTTGGCCTTCAAGAACACTACAAAGGTTGGCAATGCATATGGAATAGCAGTGGTTTTTGTGATGACACTCACATCCTCCTTCCTAGTACTCATAATGGTGATGCTATGGAAAACTCACAACCTACTCATAATCACTTACATACTTGTAATTGGAAGTGTGGAATTTATGTATCTGAGTTCAGTCCTTTACAAGTTCGACCAAGGAGGCTATCTCCCGCTGACATTTGCAGCTATTTTGATGACAATAATGTATGTGTGGAATAGTGTCTTCAGAAAAAGGTACTTTTATGAGCTCAACAACAAAATCTCCTCAGAAAAGCTCAATGAGATGGTGAATACCACCAACTTTAGGCGGATTCCTGGCGTGGCATTCTTCTATTCAGAGCTTGTTCAAGGCATCCCTCCCATCTTCAAGCACTACATCGAGCACGTACCCGCACTGCACACCGTGCTCGTCTTCGTCACCATTAAATCGCTTCCCATGAGCAAGGTTCCAGCGGATGAACGTTTCCTTTTCCGACAACTAGAAGTCAAGGAGATCGATGTGTTCCGCTGTGTTGTTCGATATGGGTACACGGATGTACACACCGAACAAGAGTCGTTCGAGAAGATTTTACTCGAAAGATTGAAGGAGTTCGAAAGAGACCAACGGAAGTTGTCTAAGGTGAAAAAT 1311 44.09 IVWISVGILVCLFMVQRLGTDKVGYSFAPVICIWFAFNAGIGVYNFIKYDPTVLKALNPKYIVDYFQRNKKDAWISLGGTVLSITGTEALFADVGHFSVRSVQLSMSAVTYPALICAYVGQTAFLRKHSDLVADTFYKSIPGGLYWPMFVVAVLASSIASQAMISGTFSIIQQSLSLGCFPRVKVVHISDKYEGQVYVPEVNYLLMLACIGVTLAFKNTTKVGNAYGIAVVFVMTLTSSFLVLIMVMLWKTHNLLIITYILVIGSVEFMYLSSVLYKFDQGGYLPLTFAAILMTIMYVWNSVFRKRYFYELNNKISSEKLNEMVNTTNFRRIPGVAFFYSELVQGIPPIFKHYIEHVPALHTVLVFVTIKSLPMSKVPADERFLFRQLEVKEIDVFRCVVRYGYTDVHTEQESFEKILLERLKEFERDQRKLSKVKN 437
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 28021992 28024573 + MC06g2052 Mch6g2623 692070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g2623 437 NCBIfam potassium uptake protein 1 431 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Mch6g2623 437 Pfam K+ potassium transporter integral membrane domain 2 320 IPR053951 -
Mch6g2623 437 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 430 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Mch6g2623 437 Pfam K+ potassium transporter C-terminal domain 333 419 IPR053952 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g2623 Mch-Chr6:28021992 Mch9g0768 Mch-Chr9:5746091 2.57E-229 dispersed
Mch6g2623 Mch-Chr6:28021992 Mch8g2202 Mch-Chr8:25070505 4.41E-278 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g2623 K03549 - csv:101215797 753.821