Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g2632 CCAAAATTCAATCATTCATACTATACGTACATATATAGTCCCTCTATAAAAAGAAGCCTGGGGCTCCCTTCTTCACAGAACACAAAATTTCCTCAAAGATTCTCTGTTAAAGAAATGGCTTTCTACAAAGCATTAGCCTTTATTCTGCTCGCGGCCATGCTGATGGCTGCCGGGCCGACAGCAGCACAGCTGAGCCCGACGTTCTATGACGCCACATGCCCCGACGTTGCCACCATCGTCAGCAATGCATTGGCCCAAGCTCTCCAAACCGACGCCCGAGCTGGTGCTAAACTCATCCGCTTTCACTTCCACGACTGCTTCGTCAACGGATGCGATGGGTCGGTTCTACTTGAAGACTCGGTAGCAGACGGCATAGACAGCGAGCAAAACGCGCCGGGAAACCAAGGGATACAAGGCCAAGATATAGTCGCGAACATCAAAACAGCGGTGGAAAACGCCTGCCCGGGCGTCGTCTCCTGCGCCGACATCTTAGCCATTGCATCCAATGCTTCTGTGGTTTTGGCAGGAGGAGAGGGATGGGAGGTGCCATTGGGAAGAAGAGACAGCAGAATAGCTAATAGATCGGGAGCTGAGAGCAACCTTCCCAGCCCTTTTGAAGGAGTTGCAAATCTTACTGCCATGTTTGCTAACGTTGGTCTTGATTCCACTGATCTTGTCGCTTTGTCTGGAGCACACACGTTCGGGCGTTCAAGGTGCAGGTTCTTCAGTGGGCGTCTGAACAACTTCAACGGAACCCAAAGCCCCGACCCGACACTGGACCCTACCTACAGAGACGTTCTTCTGGAGGCCTGCCCTCAGGGCGGGGACGACAATCGTGTCAATCTTGATCCGACAACTCCCGACCAATTCGACAACAACTACTTCACCAATCTGCAGGCCCAGCGCGGGCTTCTTACCAGCGACCAGGTCCTGTTCTCCACCGCCACCGCCGCCACGGTGGACGTCGTCAACCGCTTCGCCGGAAGCCAGGCGGAGTTCTTCGCAGGATTTGGGGCGTCCATGGTGAAGATGGGGAATATCGGCCCCAAGACGGGGACCGATGGGGAAATTAGGCTCACTTGTTCTACAGTCAATCCTTTGCCTTCTGTTGCTGATATGTAA 1122 53.57 PKFNHSYYTYIYSPSIKRSLGLPSSQNTKFPQRFSVKEMAFYKALAFILLAAMLMAAGPTAAQLSPTFYDATCPDVATIVSNALAQALQTDARAGAKLIRFHFHDCFVNGCDGSVLLEDSVADGIDSEQNAPGNQGIQGQDIVANIKTAVENACPGVVSCADILAIASNASVVLAGGEGWEVPLGRRDSRIANRSGAESNLPSPFEGVANLTAMFANVGLDSTDLVALSGAHTFGRSRCRFFSGRLNNFNGTQSPDPTLDPTYRDVLLEACPQGGDDNRVNLDPTTPDQFDNNYFTNLQAQRGLLTSDQVLFSTATAATVDVVNRFAGSQAEFFAGFGASMVKMGNIGPKTGTDGEIRLTCSTVNPLPSVADM 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 28090963 28093218 - MC06g2060 Mch6g2632 692079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g2632 373 CDD secretory_peroxidase 63 364 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Mch6g2632 373 ProSitePatterns Peroxidases proximal heme-ligand signature. 224 234 IPR019793 -
Mch6g2632 373 Gene3D Peroxidase, domain 2 202 344 - -
Mch6g2632 373 PANTHER PEROXIDASE 72-RELATED 48 364 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch6g2632 373 PRINTS Haem peroxidase superfamily signature 95 109 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch6g2632 373 PRINTS Haem peroxidase superfamily signature 158 175 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch6g2632 373 PRINTS Haem peroxidase superfamily signature 283 298 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch6g2632 373 PRINTS Haem peroxidase superfamily signature 176 188 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch6g2632 373 PRINTS Haem peroxidase superfamily signature 224 239 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch6g2632 373 ProSiteProfiles Plant heme peroxidase family profile. 63 365 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch6g2632 373 SUPERFAMILY Heme-dependent peroxidases 63 366 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch6g2632 373 PRINTS Plant peroxidase signature 176 191 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch6g2632 373 PRINTS Plant peroxidase signature 339 352 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch6g2632 373 PRINTS Plant peroxidase signature 97 117 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch6g2632 373 PRINTS Plant peroxidase signature 138 151 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch6g2632 373 PRINTS Plant peroxidase signature 73 92 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch6g2632 373 PRINTS Plant peroxidase signature 297 314 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch6g2632 373 PRINTS Plant peroxidase signature 223 235 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch6g2632 373 PRINTS Plant peroxidase signature 281 296 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch6g2632 373 PRINTS Plant peroxidase signature 157 167 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch6g2632 373 FunFam Peroxidase 67 210 - -
Mch6g2632 373 Pfam Peroxidase 80 327 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch6g2632 373 Gene3D - 68 365 - -
Mch6g2632 373 FunFam Peroxidase 202 344 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0078 Mch-Chr2:596146 Mch6g2632 Mch-Chr6:28090963 1.71E-134 dispersed
Mch2g0081 Mch-Chr2:629035 Mch6g2632 Mch-Chr6:28090963 1.03E-137 dispersed
Mch2g0082 Mch-Chr2:634992 Mch6g2632 Mch-Chr6:28090963 6.21E-143 dispersed
Mch2g0083 Mch-Chr2:642790 Mch6g2632 Mch-Chr6:28090963 1.61E-154 dispersed
Mch2g0084 Mch-Chr2:650838 Mch6g2632 Mch-Chr6:28090963 6.84E-122 dispersed
Mch4g2473 Mch-Chr4:25560499 Mch6g2632 Mch-Chr6:28090963 4.99E-90 dispersed
Mch6g2632 Mch-Chr6:28090963 Mch9g0620 Mch-Chr9:4637878 1.51E-70 dispersed
Mch6g2632 Mch-Chr6:28090963 Mch1g1543 Mch-Chr1:16768075 1.16E-86 transposed
Mch6g2632 Mch-Chr6:28090963 Mch10g0764 Mch-Chr10:5342204 1.08E-86 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g2632 K00430 - csv:101215530 508.064