Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g2638 ATGGGTTACAGAGGGAAGTTTCCAACGTGGGTTCGGGCCGGAGACCGGCAGCTGCTGCATTCGGCATCGCCGAAGGCCAATCTGGTGGTGGCACAGGATGGGTCGGGGAATTATCGGATGATTACGGCGGCGTTGGCAGCGGTGGGGAGGAGGAGCGGGAGCGGGAGATTTGTGATATATGTGAAAAGAGGGGTTTACGAGGAGAATGTGGTGATTGGGAATGAGATGAAGAATATAATGCTTCTGGTGGATGGATTGAATAATGAAGTGTTGGAGGAGGCTCACAACTTTCAATTCTGCTACTGTTGTGGAGAACGTTTTATTGCCTGTGGCATCACATTCCGGAACACTGTGAAAGACCACCAAGCTGTAGCCCTCCGATCAGGCTCCGATTTCTCCGTCTTCTTCCGGTGCAGCTTCGAGGGATATCAAGCCACTCTCTTCGTCCATTCCCAAAGACAATTCTACAAGGAGTGCTACATCTACGGCACCATTGATTTCATCTTCGGCAATGCCGCTGTGGTCCTCCAAAACTGCATGATCTACGCAAGAAAACCTATCTCTGGCCACACATATTGCATCGTGACCACCCAAGGTCGCACGAACCCGAAGCAGAACACCGGAATCTCGATCCACAACTCGAGGGTGATGGCTGCAGCTGACCTCGAACCGAACTACTTGGATGACTTGGTGAACCCTGCAGGGTGGTTGGAATGGAAGGGTAACTTTGGTCTTAATACATTGTATTATGGAGAGTATAACAATTTTGGGCCTGGTTCTTCTACCAACAATAGGGTGAAATGGAAGGGTTATAGAGTAATTACAAGTGCCACAGAAGCATCAAAGTTTACTGTTGAGAATTTTATTGCTGGGAAGTCATGGCTGCCTGGGACTGGAGTGCCATTCACTGCTAGCCTTTGA 921 49.51 MGYRGKFPTWVRAGDRQLLHSASPKANLVVAQDGSGNYRMITAALAAVGRRSGSGRFVIYVKRGVYEENVVIGNEMKNIMLLVDGLNNEVLEEAHNFQFCYCCGERFIACGITFRNTVKDHQAVALRSGSDFSVFFRCSFEGYQATLFVHSQRQFYKECYIYGTIDFIFGNAAVVLQNCMIYARKPISGHTYCIVTTQGRTNPKQNTGISIHNSRVMAAADLEPNYLDDLVNPAGWLEWKGNFGLNTLYYGEYNNFGPGSSTNNRVKWKGYRVITSATEASKFTVENFIAGKSWLPGTGVPFTASL 306
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 28134168 28135718 + MC06g_new0576 Mch6g2638 692085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g2638 306 Gene3D - 21 306 IPR012334 -
Mch6g2638 306 FunFam Putative pectinesterase 57 24 214 - -
Mch6g2638 306 ProSitePatterns Pectinesterase signature 2. 161 170 IPR033131 -
Mch6g2638 306 Pfam Pectinesterase 226 291 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Mch6g2638 306 Pfam Pectinesterase 27 224 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Mch6g2638 306 PANTHER PECTINESTERASE 6 296 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Mch6g2638 306 SUPERFAMILY Pectin lyase-like 23 304 IPR011050 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g2636 Mch-Chr6:28123333 Mch6g2638 Mch-Chr6:28134168 8.99E-159 dispersed
Mch6g2638 Mch-Chr6:28134168 Mch9g0697 Mch-Chr9:5247033 2.92E-100 dispersed
Mch6g2637 Mch-Chr6:28128557 Mch6g2638 Mch-Chr6:28134168 2.04E-101 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g2638 K01051 - vvi:100262077 426.787