Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g2650 ACCCACATGCTCAAACTAATTCTTCTGGTTGCTGCGGCCCCCATTTTTCTAATTTTCGTGATTTTGGTCTTCTTGTTCCGCCACAAGCTCGCAAAAACAGAGCAGAGAGATGTAGAGAAGGCGGCGGCGGCGAAGGCAGAGGAGGAGGAGGAGCTGAGTACTTTTGAGGGCGGCGAGGATTTGACGGTGGACGAGATTCTGGAAGCTCCGGGGGAGGTGATCGGAAAATCAAAGTATGGAACTCTGTACAAGGCGTCGCTGCAGAGAAGCCAGAGGACGCGGGTACTGAGATTCCTCCGACCCGCCGCCGCCACGGAAGAATCCGGCGACGACACCGTTGGGTTTCTGGGTTCGATTCGGCACCCGAATCTGGTTCCGATGTTGGGATTCTACGCCGGCCGCCGCGGCGAGAAGCTTCTGGTTCATCCCTTTTACGGCCGGGGGAATCTGGCAGACTTCATTACAGTGGGAGAAGCAGAAGCAGAATCAGAGAGATGGGAAATCATTTACAAAATCTCCATGGGAATCGCCAAAGCCTTGGATCATCTCCACAGTGAATTGCAGAAACCGTTGGCGCACGGCAATCTCAAGTCCAAGAACATTCTTCTCGATCGGAATTTCGAGCCGCACGTCTCCGATTTCGGCCTCCATCTCCTCCTCAATCCCGCCGCAAATCAAGAACTGCTCCGAGTTTCCGCCGATTCCGGCTACAAGGCGCCGGAGCTGATCAAGATGACGGACGCCGATGAGCGGACCGACGTCTACAGCTACGGCAAAATCCTTCTCGAGTTGTTGCTGTACGGCAAAGATCAGCCGTCGAATCGAAACTCACCTCCCGACGGAGACGGCGGCGATTGCGGTGTTTCTGATGACCGGATTCTCCGATGCTCTCGGATCGTCGAGGCTTGTTGTTCTTCGTCGCCGGATCTTCGGCCGAATTTCAAGGAAGTGATTGCGAAGATTGAGGAAATCGGAAGGATTAAGATCGATTGA 993 54.28 THMLKLILLVAAAPIFLIFVILVFLFRHKLAKTEQRDVEKAAAAKAEEEEELSTFEGGEDLTVDEILEAPGEVIGKSKYGTLYKASLQRSQRTRVLRFLRPAAATEESGDDTVGFLGSIRHPNLVPMLGFYAGRRGEKLLVHPFYGRGNLADFITVGEAEAESERWEIIYKISMGIAKALDHLHSELQKPLAHGNLKSKNILLDRNFEPHVSDFGLHLLLNPAANQELLRVSADSGYKAPELIKMTDADERTDVYSYGKILLELLLYGKDQPSNRNSPPDGDGGDCGVSDDRILRCSRIVEACCSSSPDLRPNFKEVIAKIEEIGRIKID 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 28203482 28206135 + MC06g2073 Mch6g2650 692097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g2650 330 SUPERFAMILY Protein kinase-like (PK-like) 71 322 IPR011009 -
Mch6g2650 330 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 7 325 IPR052451 -
Mch6g2650 330 ProSiteProfiles Protein kinase domain profile. 68 324 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g2650 330 Coils Coil 31 51 - -
Mch6g2650 330 Gene3D Transferase(Phosphotransferase) domain 1 62 329 - -
Mch6g2650 330 Pfam Protein tyrosine and serine/threonine kinase 72 320 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g2650 Mch-Chr6:28203482 Mch9g0064 Mch-Chr9:507326 1.82E-46 dispersed
Mch10g0284 Mch-Chr10:1827667 Mch6g2650 Mch-Chr6:28203482 4.65E-108 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77525 PF07714 PK_Tyr_Ser-Thr 4.00E-25 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g2650 - - - 0.0