Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch6g2650 | ACCCACATGCTCAAACTAATTCTTCTGGTTGCTGCGGCCCCCATTTTTCTAATTTTCGTGATTTTGGTCTTCTTGTTCCGCCACAAGCTCGCAAAAACAGAGCAGAGAGATGTAGAGAAGGCGGCGGCGGCGAAGGCAGAGGAGGAGGAGGAGCTGAGTACTTTTGAGGGCGGCGAGGATTTGACGGTGGACGAGATTCTGGAAGCTCCGGGGGAGGTGATCGGAAAATCAAAGTATGGAACTCTGTACAAGGCGTCGCTGCAGAGAAGCCAGAGGACGCGGGTACTGAGATTCCTCCGACCCGCCGCCGCCACGGAAGAATCCGGCGACGACACCGTTGGGTTTCTGGGTTCGATTCGGCACCCGAATCTGGTTCCGATGTTGGGATTCTACGCCGGCCGCCGCGGCGAGAAGCTTCTGGTTCATCCCTTTTACGGCCGGGGGAATCTGGCAGACTTCATTACAGTGGGAGAAGCAGAAGCAGAATCAGAGAGATGGGAAATCATTTACAAAATCTCCATGGGAATCGCCAAAGCCTTGGATCATCTCCACAGTGAATTGCAGAAACCGTTGGCGCACGGCAATCTCAAGTCCAAGAACATTCTTCTCGATCGGAATTTCGAGCCGCACGTCTCCGATTTCGGCCTCCATCTCCTCCTCAATCCCGCCGCAAATCAAGAACTGCTCCGAGTTTCCGCCGATTCCGGCTACAAGGCGCCGGAGCTGATCAAGATGACGGACGCCGATGAGCGGACCGACGTCTACAGCTACGGCAAAATCCTTCTCGAGTTGTTGCTGTACGGCAAAGATCAGCCGTCGAATCGAAACTCACCTCCCGACGGAGACGGCGGCGATTGCGGTGTTTCTGATGACCGGATTCTCCGATGCTCTCGGATCGTCGAGGCTTGTTGTTCTTCGTCGCCGGATCTTCGGCCGAATTTCAAGGAAGTGATTGCGAAGATTGAGGAAATCGGAAGGATTAAGATCGATTGA | 993 | 54.28 | THMLKLILLVAAAPIFLIFVILVFLFRHKLAKTEQRDVEKAAAAKAEEEEELSTFEGGEDLTVDEILEAPGEVIGKSKYGTLYKASLQRSQRTRVLRFLRPAAATEESGDDTVGFLGSIRHPNLVPMLGFYAGRRGEKLLVHPFYGRGNLADFITVGEAEAESERWEIIYKISMGIAKALDHLHSELQKPLAHGNLKSKNILLDRNFEPHVSDFGLHLLLNPAANQELLRVSADSGYKAPELIKMTDADERTDVYSYGKILLELLLYGKDQPSNRNSPPDGDGGDCGVSDDRILRCSRIVEACCSSSPDLRPNFKEVIAKIEEIGRIKID | 330 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 28203482 | 28206135 | + | MC06g2073 | Mch6g2650 | 692097 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch6g2650 | 330 | SUPERFAMILY | Protein kinase-like (PK-like) | 71 | 322 | IPR011009 | - | |
Mch6g2650 | 330 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED | 7 | 325 | IPR052451 | - | |
Mch6g2650 | 330 | ProSiteProfiles | Protein kinase domain profile. | 68 | 324 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch6g2650 | 330 | Coils | Coil | 31 | 51 | - | - | |
Mch6g2650 | 330 | Gene3D | Transferase(Phosphotransferase) domain 1 | 62 | 329 | - | - | |
Mch6g2650 | 330 | Pfam | Protein tyrosine and serine/threonine kinase | 72 | 320 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch6g2650 | Mch-Chr6:28203482 | Mch9g0064 | Mch-Chr9:507326 | 1.82E-46 | dispersed | |
Mch10g0284 | Mch-Chr10:1827667 | Mch6g2650 | Mch-Chr6:28203482 | 4.65E-108 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77525 | PF07714 | PK_Tyr_Ser-Thr | 4.00E-25 | CL0016 | Mch | PK |
Pathway information
