Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g2661 ATGGCGGAGTCGGAAAGTGGGACGCCGGCGGCGTCGGCGCCGGCGACGCCGGGGACGCCGGGGGGGCCGCTGTTCTCCGGCCTCCGTGTGGATTCGCTGTCGTACGATCGGAAGTCAATGCCGCGGTGTAAGTGCCTGCCCGTGAATGCTCCCACGTGGGGAGAGCCTCACACGTGCTTCACTGACTTCCCCGCTCCTGATATCTCTCTCACCCGCAAGCTGGGAGCGGAATTTGTGGGAACATTCATCCTCATATTTGCGGCGACGGCGGGGCCCATCGTGAACCAAAAGTACGGCGGCGTGGAGACTCTGATTGGAAATGCAGCCTGCGCCGGGCTGGCAGTGATGATCGTGATTCTGTCGACCGGCCACATCTCCGGCGCCCACCTCAACCCGTCGCTGACGATCGCCTTCGCCGCCCTCCGCCATTTCCCGTGGATCCAAGTCCCCGCCTACATCGCGGCCCAGGTCTCTGCCTCGATCTGTGCCTCATTCGCACTCAAAGGCGTTTTCCACCCGTTCATGTCCGGTGGCGTCACCGTCCCTTCCGTCAGCACTGGCCAGGCCTTCGCTCTCGAGTTCTTGATCACTTTCAATCTCTTGTTCGTCGTCACTGCCGTTGCCACTGACACTCGCGCGGTAGGAGAGTTGGCTGGAATTGCAGTAGGAGCAACAGTGATGCTCAACATCCTCGTCGCAGGGCCCTCAAGTGGTGGTTCGATGAACCCAGTGAGGACTCTGGGCCCCGCCGTCGCCGTCGGAAATTATAGGGAATTGTGGGTGTACCTGGTGGCTCCGACACTGGGGGCCATCGTTGGCGCCGGAACCTACACCATCGTCAAGCTGAGAGACGACGAAGTGGGTGCTCCGGTGCAGGTAAGGAGCTTCCGTCGCTGA 897 61.87 MAESESGTPAASAPATPGTPGGPLFSGLRVDSLSYDRKSMPRCKCLPVNAPTWGEPHTCFTDFPAPDISLTRKLGAEFVGTFILIFAATAGPIVNQKYGGVETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWIQVPAYIAAQVSASICASFALKGVFHPFMSGGVTVPSVSTGQAFALEFLITFNLLFVVTAVATDTRAVGELAGIAVGATVMLNILVAGPSSGGSMNPVRTLGPAVAVGNYRELWVYLVAPTLGAIVGAGTYTIVKLRDDEVGAPVQVRSFRR 298
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 28289306 28295618 + MC06g2081 Mch6g2661 692108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g2661 298 PRINTS Major intrinsic protein family signature 260 280 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch6g2661 298 PRINTS Major intrinsic protein family signature 111 135 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch6g2661 298 PRINTS Major intrinsic protein family signature 148 167 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch6g2661 298 PRINTS Major intrinsic protein family signature 223 245 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch6g2661 298 PRINTS Major intrinsic protein family signature 72 91 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch6g2661 298 PRINTS Major intrinsic protein family signature 192 210 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch6g2661 298 Pfam Major intrinsic protein 69 277 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch6g2661 298 ProSitePatterns MIP family signature. 129 137 IPR022357 -
Mch6g2661 298 PANTHER AQUAPORIN NIP2-1 69 284 IPR034294 -
Mch6g2661 298 Gene3D Glycerol uptake facilitator protein. 65 290 IPR023271 -
Mch6g2661 298 MobiDBLite consensus disorder prediction 1 24 - -
Mch6g2661 298 FunFam Aquaporin NIP2-1 60 292 - -
Mch6g2661 298 SUPERFAMILY Aquaporin-like 69 285 IPR023271 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g2661 Mch-Chr6:28289306 Mch8g1072 Mch-Chr8:7599888 5.84E-117 dispersed
Mch6g2661 Mch-Chr6:28289306 Mch6g2662 Mch-Chr6:28299254 2.59E-155 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g2661 K09874 - csv:101212651 543.117