Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g2663 ATGGGTTTGCTCCGATTCTTTAGAATGAAGGGGAAATCCAAATCCAAATCAAAATCAAAATCCAGAGTTGCTGATAAAGAAACCCAATCCGGGGATTTGGATTGCATTTTTGAGTCTGGTTTTGGTGCTACCAGGTTCTGCTGGACTGAGATCCAAGCTTTCACTATGAATTTCTCCACCCTCGTCGGCGCCGGCGGCTTCAGCAACGTCTATCTTGCTCGGACGCCGGCTTCCCCCACGGCGGCGGTCAAGATTCTCGGCTCTAGTGAGCGCCTGAACCGGATGTTCCGCCAGGAATTGGACATACTTCTGCAACTTCGCCACCGTAATATTGTCACTTTCATTGGCTACTGTGATGACCGAGGAGAAGGAGCTCTGGTTTTCGAATATGTCCCAAATGGGAACTTGCAAGAGAAGCTCCACGGCGGTGCGAAGGGCCGGCAGCAGGCGGCGGCGCTGTCATGGAGAATCCGGCTACTCATAGCCTACCAGCTAGCTCAAGCAATCGAATACCTCCACGAGAAATGCAGTCTTCAAATTGTCCACGGCGACATTAAATCTTCCAACATTTTACTCGACGAGCGATTCAATTGCAAACTCTGCGATTTCGGCTCTGCGAAAATGGGATTCTCGTCGGCGGTGACGAATCCGCCGTCTTCTCCGTCGAGCCCCTTCCGAGCGAAGCAATTGATGATGGGATCTCCGGGCTACACCGATCCCCAATATCTCAGAACCGGAATCGCCTCCAAGAAGAACGACGTCTACAGCTTCGGCGTCGTTCTCCTCGAGCTCATCACCGGAAAAGAGGCATTCTGCTCGGAGAAGGGCCAGATTCTGGCATCGATTTTGCCGCCGGCGATTCCCGACGCCGGAGGAATCAAACCGCCGGCGGTCAAGGAACTAGTGGATCCACGCCTACGGGGAGATTACGACGTGGAGGAAGCCGGCGCGTTGCTCTCAATCGCAGCGCTCTGCGTTTCGCAGCCGCCGGCGCCCAGGCCGGCAATCGGCGGCTTGCTGCAGATGATGAGGGAGAAGATCGGTTGGGTTTCGGGAAACTCGGCGCCGGAGAAACGTGGCGGTAAATTATTGGACACGGGAAGGTGGTAA 1110 54.59 MGLLRFFRMKGKSKSKSKSKSRVADKETQSGDLDCIFESGFGATRFCWTEIQAFTMNFSTLVGAGGFSNVYLARTPASPTAAVKILGSSERLNRMFRQELDILLQLRHRNIVTFIGYCDDRGEGALVFEYVPNGNLQEKLHGGAKGRQQAAALSWRIRLLIAYQLAQAIEYLHEKCSLQIVHGDIKSSNILLDERFNCKLCDFGSAKMGFSSAVTNPPSSPSSPFRAKQLMMGSPGYTDPQYLRTGIASKKNDVYSFGVVLLELITGKEAFCSEKGQILASILPPAIPDAGGIKPPAVKELVDPRLRGDYDVEEAGALLSIAALCVSQPPAPRPAIGGLLQMMREKIGWVSGNSAPEKRGGKLLDTGRW 369
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 28305449 28307830 - MC06g2083 Mch6g2663 692110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g2663 369 Gene3D Phosphorylase Kinase; domain 1 15 130 - -
Mch6g2663 369 ProSiteProfiles Protein kinase domain profile. 56 347 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g2663 369 ProSitePatterns Protein kinases ATP-binding region signature. 62 84 IPR017441 GO:0005524(InterPro)
Mch6g2663 369 PANTHER OS01G0750732 PROTEIN 19 344 IPR050885 -
Mch6g2663 369 SUPERFAMILY Protein kinase-like (PK-like) 43 343 IPR011009 -
Mch6g2663 369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch6g2663 369 Pfam Protein kinase domain 59 277 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g2663 369 SMART serkin_6 56 350 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch6g2663 369 Gene3D Transferase(Phosphotransferase) domain 1 131 350 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g2663 Mch-Chr6:28305449 Mch11g0927 Mch-Chr11:6349053 1.99E-51 dispersed
Mch6g2663 Mch-Chr6:28305449 Mch10g1148 Mch-Chr10:8604270 7.00E-50 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77527 PF00069 Pkinase 2.60E-40 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g2663 - - - 0.0