Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch6g2664 ATGGAAGGGGCCGGCGCCGGAGGATCAGGATCGGGATCGGGATCGGGATTCGGAGTCACCACGCCGCCCGAGGGGATGACCGATTCCCAGCAAGTCGAAGCTGCTTCCCCCATTAGCAGCCGTCCGCCGGCACCTTCCTCATTCAGTTACGACGACCTCATCCGTCTCGGCGCCGACGATGCAGACCGCACCGCCGCCGCCGGCAATCGCTGGCCTCGTCAAGAAACTCTAGCGCTCCTCAAGATTAGGTCCGACATGGATTCCGCCTTCCGCGACGCCACTCTCAAAGGCCCTCTCTGGGAAGAGGTCTCCAGGAAGCTAGGGGAGGTAGGATACGGCAGAAGTGGGAAGAAATGCAAAGAGAAATTTGAGAACGTTCAGAAATATTACAAGCGCACCAAAGAAGGCCGAGGCGGCCGCCAAGATGGCAAAACTTACAAATTCTTCACCCAACTTGAAGCCCTTCACAACGCCACCGCCGCCGCCTCTACTCCCAATGTCGTCCCAGTTTCTTTGTCGCTCCCCTCGCCCGTTCCCTTCGGGATCAGCAACCCAACCCCAATCTCCTCCCTCAAAATTCCCCCCGCCGCCGCCACCATTTCCTCCTCGGAAACCCCCGTCGGAATCGGAGTGTTCGCCACTCCTGCGGCAGCCGCACGGGGCGTGAGCATTTCGTCGAACAGTTCGTCGTCATCGACGGGATCCGAGGAGGAGTTGGATGCGGTGGACCTGGAGGGGGAGCCCTCGACGAGCCGGAAGCGGCGGCGGGGGTCATCGGGGAGAAGGCACAGGATGATGATGGGTTTTTTCGAGAATCTGATGAAGGAAGTGATGCAGAAGCAGGAGGTTATGCAGCAGAAGTTTCTGGAAGCGATTGAGAAGAGGGAGCAGGATAGAATCGCCAGAGAAGAGACGTGGAAGAGGCAGGAAATGGCCAGGCTCAGCCGCGAGCAGGAGCGCGTGGCTCAAGACCGTACAATTTCTGCCTCAAGAGATGCTGCCATTATTGCTTTTCTTCAGAAATTTACTGCCCAAACCCTTCAATTACCGCAACCACCAATCAATTTCCCTTCCCCTTCTGCCCCACAACAACAACACCATGATTTGCCTGTGCCTGCTCCTGCGCCTGCGCCTATGCCAGCTCCAGCGCCACAGGCCCTTCTCCAAATGGAGCACTACGAGCAGCAGCATGGGGGAGACGGGGGGTCCTCCTCGGAGCCCATTTCTTCCCGGTGGCCGAAGCCGGAAGTTCTGGCTCTGATAAAGCTTCGTGGTGGGCTGGAGCCGCGGTACCAAGAGACGGGCCCCAAGGGCCCACTCTGGGACGAGATTTCCGCCAGAATGCACCGGATGGGCTACAACAGGAGCGCCAAGAGATGCAAAGAGAAATGGGAGAACATCAACAAGTACTTCAAGAAGGTCAAGGACAGCAACAAAAAACGCCGCCACGACTCCAAAACCTGCCCCTATTTCGACGAACTCGACGCCCTCTACCGGAGCAAGATTATTACTATTCCCGACGCTCCCGCCATCGCTACCGCTACTGCCAGTACAACCCCATCTTCACCCATTCTTCCAATTCCACAATCTCAACCACACAACACTGCCACTGCTGATTTGTCCGCCAGCCTCTTTGGAGAACCAACGGAAGAACCCGCGCCCACGAAGCCAGAAGACATTGTGAATGAGTTGATGGAGCTGCAAGAGCTTTATGATGATGAGCATCATCACCCTCAACGCCCACACTTTGTACCACAACCCGGTAGCAACGGAGACGAAGAAGACGATGATGACGACTATTGCAGCGGCGGCGACGACGTGCCGGAGGGAAAGAGGAATAGTATGGATTATAAGATAGAGTTTCAGAGACGAAATGTGGGGAACTCCAATGGCGTTGGGAGTGAGTTTCCATCAATGGCGGTGGTTCAATAG 1932 56.52 MEGAGAGGSGSGSGSGFGVTTPPEGMTDSQQVEAASPISSRPPAPSSFSYDDLIRLGADDADRTAAAGNRWPRQETLALLKIRSDMDSAFRDATLKGPLWEEVSRKLGEVGYGRSGKKCKEKFENVQKYYKRTKEGRGGRQDGKTYKFFTQLEALHNATAAASTPNVVPVSLSLPSPVPFGISNPTPISSLKIPPAAATISSSETPVGIGVFATPAAAARGVSISSNSSSSSTGSEEELDAVDLEGEPSTSRKRRRGSSGRRHRMMMGFFENLMKEVMQKQEVMQQKFLEAIEKREQDRIAREETWKRQEMARLSREQERVAQDRTISASRDAAIIAFLQKFTAQTLQLPQPPINFPSPSAPQQQHHDLPVPAPAPAPMPAPAPQALLQMEHYEQQHGGDGGSSSEPISSRWPKPEVLALIKLRGGLEPRYQETGPKGPLWDEISARMHRMGYNRSAKRCKEKWENINKYFKKVKDSNKKRRHDSKTCPYFDELDALYRSKIITIPDAPAIATATASTTPSSPILPIPQSQPHNTATADLSASLFGEPTEEPAPTKPEDIVNELMELQELYDDEHHHPQRPHFVPQPGSNGDEEDDDDDYCSGGDDVPEGKRNSMDYKIEFQRRNVGNSNGVGSEFPSMAVVQ 643
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 28331190 28335151 + MC06g2084 Mch6g2664 692111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch6g2664 643 PANTHER FI21293P1 45 528 - -
Mch6g2664 643 SMART sant 67 129 IPR001005 -
Mch6g2664 643 SMART sant 408 470 IPR001005 -
Mch6g2664 643 MobiDBLite consensus disorder prediction 604 619 - -
Mch6g2664 643 FunFam Trihelix transcription factor GT-2 71 132 - -
Mch6g2664 643 MobiDBLite consensus disorder prediction 576 643 - -
Mch6g2664 643 CDD GT1 410 475 - -
Mch6g2664 643 Gene3D - 412 473 - -
Mch6g2664 643 Gene3D - 71 132 - -
Mch6g2664 643 MobiDBLite consensus disorder prediction 220 263 - -
Mch6g2664 643 MobiDBLite consensus disorder prediction 13 46 - -
Mch6g2664 643 MobiDBLite consensus disorder prediction 1 51 - -
Mch6g2664 643 Pfam Myb/SANT-like DNA-binding domain 410 497 IPR044822 -
Mch6g2664 643 Pfam Myb/SANT-like DNA-binding domain 69 155 IPR044822 -
Mch6g2664 643 ProSiteProfiles Myb-like domain profile. 63 127 IPR001005 -
Mch6g2664 643 MobiDBLite consensus disorder prediction 351 382 - -
Mch6g2664 643 FunFam Trihelix transcription factor GT-2 412 473 - -
Mch6g2664 643 MobiDBLite consensus disorder prediction 514 536 - -
Mch6g2664 643 ProSiteProfiles Myb-like domain profile. 404 468 IPR001005 -
Mch6g2664 643 CDD GT1 69 134 - -
Mch6g2664 643 MobiDBLite consensus disorder prediction 220 237 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g1820 Mch-Chr2:17628389 Mch6g2664 Mch-Chr6:28331190 1.78E-89 dispersed
Mch3g0748 Mch-Chr3:11703588 Mch6g2664 Mch-Chr6:28331190 2.47E-39 dispersed
Mch6g2664 Mch-Chr6:28331190 Mch9g1840 Mch-Chr9:20215548 2.81E-32 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43659 PF13837 Myb_DNA-bind_4 4.10E-22 CL0123 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch6g2664 - - - 0.0